GGGenome | Results

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

UNVERIFIED_CONTAM: Avena longiglumis isolate 447 chromosome 6.
CP125978.1:53931056-53931075

GAATGCATCCCAGGCAACGGTGACAAGCTC53931056AATCTTGACCGCAAACAAGGCCCCATGTCAAGAGCCGGTGCAATGGATCG

Malus hybrid cultivar cultivar Flame chromosome 11.
CP141920.1:2475755-2475774

TCAAGAAAACAATTGTATACTATTAAGAAA2475755AATCTTGACCGCAAACAAGGGAAAGTAGAATCCTAACTTAACCAAATCTA

Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:2433858-2433877

TCAAGAAAACAATTGTATACTATTAAGAAA2433858AATCTTGACCGCAAACAAGGGAAAGTAGAATCCTAACTTAACCAAATCTA

Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141963.1:2533486-2533505

TCAAGAAAACAATTGTATACTATTAAGAAA2533486AATCTTGACCGCAAACAAGGGAAAGTAGAATCCTAACTTAACCAAATCTA

Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141980.1:2630743-2630762

TCAAGAAAACAATTGTATACTATTAAGAAA2630743AATCTTGACCGCAAACAAGGGAAAGTAGAATCCTAACTTAACCAAATCTA

Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:2473228-2473247

TCAAGAAAACAATTGTATACTATTAAGAAA2473228AATCTTGACCGCAAACAAGGGAAAGTAGAATCCTAACTTAACCAAATCTA

Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143385.1:2500288-2500307

TCAAGAAAACAATTGTATACTATTAAGAAA2500288AATCTTGACCGCAAACAAGGGAAAGTAGAATCCTAACTTAACCAAATCTA

Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:2588560-2588579

TCAAGAAAACAATTGTATACTATTAAGAAA2588560AATCTTGACCGCAAACAAGGGAAAGTAGAATCCTAACTTAACCAAATCTA

Malus domestica genome assembly, chromosome: 11.
OU696687.1:2581889-2581908

TCAAGAAAACAATTGTATACTATTAAGAAA2581889AATCTTGACCGCAAACAAGGGAAAGTAGAATCCTAACTTAACCAAATCTA

Malus domestica genome assembly, chromosome: 11.
OU744552.1:2637398-2637417

TCAAGAAAACAATTGTATACTATTAAGAAA2637398AATCTTGACCGCAAACAAGGGAAAGTAGAATCCTAACTTAACCAAATCTA

Malus domestica genome assembly, chromosome: 11.
OU744963.1:2677349-2677368

TCAAGAAAACAATTGTATACTATTAAGAAA2677349AATCTTGACCGCAAACAAGGGAAAGTAGAATCCTAACTTAACCAAATCTA

Malus domestica genome assembly, chromosome: 11.
OU745001.1:2652548-2652567

TCAAGAAAACAATTGTATACTATTAAGAAA2652548AATCTTGACCGCAAACAAGGGAAAGTAGAATCCTAACTTAACCAAATCTA

Beta vulgaris subsp. vulgaris genome assembly, chromosome: 1.
OX392547.1:46289845-46289864

TAGTAATAGGTGTATTGGTTTGACGCATCC46289845AATCTTGACCGCAAACAAGGGCTTCTACCATTCTAGTACTCAAAGAAGTG

Beta vulgaris subsp. vulgaris genome assembly, chromosome: 3.
OX392549.1:1035263-1035282

TAGTAATAAGTGTATTGGTTTGACGCATCC1035263AATCTTGACCGCAAACAAGGGCTTCTACCATTCTAGTACTCAAAGAAGTG

Beta vulgaris subsp. vulgaris genome assembly, chromosome: 6.
OX392552.1:32001022-32001041

TAGTAATAAGTGTATTGGTTTGACGCATCC32001022AATCTTGACCGCAAACAAGGGCTTCTACCATTCTAGTACTCAAAGAAGTG

Beta vulgaris subsp. vulgaris genome assembly, chromosome: 6.
OX392552.1:32006083-32006102

TAGTAATAAGTGTATTGGTTTGACGCATCC32006083AATCTTGACCGCAAACAAGGGCTTCTACCATTCTAGTACTCAAAGAAGTG

Beta vulgaris subsp. vulgaris genome assembly, chromosome: 1.
OX392556.1:45755820-45755839

TAGTAATAGGTGTATTGGTTTGACGCATCC45755820AATCTTGACCGCAAACAAGGGCTTCTACCATTCTAGTACTCAAAGAAGTG

Beta vulgaris subsp. vulgaris genome assembly, chromosome: 3.
OX392558.1:1009063-1009082

TAGTAATAAGTGTATTGGTTTGACGCATCC1009063AATCTTGACCGCAAACAAGGGCTTCTACCATTCTAGTACTCAAAGAAGTG

Beta vulgaris subsp. vulgaris genome assembly, chromosome: 6.
OX392561.1:32038958-32038977

TAGTAATAAGTGTATTGGTTTGACGCATCC32038958AATCTTGACCGCAAACAAGGGCTTCTACCATTCTAGTACTCAAAGAAGTG

Beta vulgaris subsp. vulgaris genome assembly, chromosome: 6.
OX392561.1:32044015-32044034

TAGTAATAAGTGTATTGGTTTGACGCATCC32044015AATCTTGACCGCAAACAAGGGCTTCTACCATTCTAGTACTCAAAGAAGTG

Epithemia pelagica genome assembly, chromosome: 6.
OX337233.1:2845627-2845646

AGAAGTGTCATCGTCTTCTCACGGACACTT2845627CCTTGTTTGCGGTCAAGATTCTCGCAATGTTGATGCTTCAAAACCACCCG

Beta vulgaris subsp. vulgaris genome assembly, chromosome: 8.
OX392563.1:22027142-22027161

TACTTCTTTGAGTACTAGAATGGTAGAAGC22027142CCTTGTTTGCGGTCAAGATTGGATGCGTCAAACCAATACACTTATTACTC

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Debug Info:

0.008 | 0.008 | search_start;
0.112 | 0.103 | search_plus_done; http://172.18.8.135:50400/match?q=AATCTTGACCGCAAACAAGG&k=0&no_gap=0&offset=0&limit=50
0.151 | 0.039 | search_minus_done; http://172.18.8.135:50400/match?q=CCTTGTTTGCGGTCAAGATT&k=0&no_gap=0&offset=0&limit=30
0.152 | 0.001 | cgi_end;

Summary:

Results:

Data Export:

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