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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:51:48, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Apodemus sylvaticus genome assembly, chromosome: 15.
OX359312.1:72769341-72769359
GATGATGATAATGATGATGGCTTTGATGAA72769341AATGATGAGGGTAAAGATGATTAGTGTATACTTATACATATTAAATGGA
Muscardinus avellanarius genome assembly, chromosome: 8.
OY726565.1:12341914-12341932
ACACACGGCTTCCCAGAAGACAGAAAAGTA12341914AATGATGAGGGTAAAGATGGAGTCATATCCTGAAGAGCTCCTGAGCCAT
Zeus faber genome assembly, chromosome: 18.
OY482862.1:62598-62616
TCTAATGGTGCGGCACCTATGCCAAAAGAA62598AATGATGAGGGTAAAGATGACCCAAATCCTGAAAATGTAGTGCTCTTTG
Citrus reshni microsatellite DNA, locus mCrCIR02D09.
FR677569.1:68-86
GTTAAGATACTTACTTCAGTTATTTTTATG68AATGATGAGGGTAAAGATGTAAATTTGTGCCGGGCGACCCGAAAATCTT
Arctium minus genome assembly, chromosome: 4.
OX941083.1:55315530-55315548
GTCAGCGATGCAGGATAGGCTAACGTCGAT55315530AATGATGAGGGTAAAGATGGCAACGACAGTGGTGAGACGACAACGGTGA
Geranium rotundifolium genome assembly, chromosome: 2.
OY987312.1:38451816-38451834
ACGCATACCATCTGCATCCAAATTACGAGC38451816AATGATGAGGGTAAAGATGATCGCTCGAAAGCTATCAGCCTCAAAATCC
Lycaena phlaeas genome assembly, chromosome: 9.
HG995172.1:10719345-10719363
TTCATTTAAAATGGCCTGATCCAGACTGAT10719345AATGATGAGGGTAAAGATGATGATGGTAAAGATGATGATAATGATGATG
Lymantria monacha genome assembly, chromosome: 5.
LR991086.1:21095873-21095891
AACCCTTCAAAGAAGAGATTTAAGATATTC21095873AATGATGAGGGTAAAGATGATAGCTATACGATATTGTACAGGTTGGTTC
4_Tbi_b3v08.
OD570539.1:23132-23150
AGATTAATAAAGGAGAAAATGGGAGAAATC23132AATGATGAGGGTAAAGATGTGGATGAAATGGCGGAAAATCTGGAAAAGA
Apeira syringaria genome assembly, chromosome: 6.
OW203660.1:462621-462639
CTTCAGCGACGGACGGTCTGTGGTTGTCGT462621AATGATGAGGGTAAAGATGATTGTGATTTACTTTTTATAAACCAATTAA
Sphaerophoria taeniata genome assembly, chromosome: 1.
OX016540.1:74834140-74834158
TTGGAAAACGATGATGATGATGATAATGAC74834140AATGATGAGGGTAAAGATGTTGTTATTGTTGATGCTGATGAACTTGATG
Sphaerophoria taeniata genome assembly, chromosome: 1.
OX016540.1:134527903-134527921
TTGGAAAACGATGATGATGATGATAATGAC134527903AATGATGAGGGTAAAGATGTTGTTATTGTTGATGCTGATGAACTTGATG
Sphaerophoria taeniata genome assembly, chromosome: 1.
OX016540.1:142197503-142197521
TTGGAAAACGATGATGATGATGATGATGAC142197503AATGATGAGGGTAAAGATGTTGTTATTGTTGATGCTGATGAACTTATCA
Sphaerophoria taeniata genome assembly, chromosome: 1.
OX016540.1:164350090-164350108
TTGGAAAACGATGATGATGATGATGATGAC164350090AATGATGAGGGTAAAGATGTTGTTATTGTTGATGCTGATGAACTTGATG
Sphaerophoria taeniata genome assembly, chromosome: 2.
OX016541.1:55785360-55785378
GGTGAGTTGGAAAACAATGATGATGATGAC55785360AATGATGAGGGTAAAGATGTTATTGTTGATGCTGATGAACTTGATGAAG
Sphaerophoria taeniata genome assembly, chromosome: 2.
OX016541.1:78761732-78761750
TTGGAAAACGATGATGATGATGATAATGAC78761732AATGATGAGGGTAAAGATGTTGTTATTGTTGATGCTGATGAACTTGATG
Sphaerophoria taeniata genome assembly, chromosome: 2.
OX016541.1:90126496-90126514
TTGGAAAACGATGATGATGATGATGATGAC90126496AATGATGAGGGTAAAGATGTTGTTATTGTTGATGCTGATAAACTTGATG
Sphaerophoria taeniata genome assembly, chromosome: 2.
OX016541.1:102424648-102424666
TTGGAAAACGATGATGATGATGATAATGAC102424648AATGATGAGGGTAAAGATGTTGTTATTGTTGATGCTGATGAAGTTGATG
Sphaerophoria taeniata genome assembly, chromosome: 2.
OX016541.1:125640649-125640667
TTGGAAAACGATGATGATGATGATGATGAC125640649AATGATGAGGGTAAAGATGTTGTTATTGTTGATGCTGATGAACTTGATG
Sphaerophoria taeniata genome assembly, chromosome: 2.
OX016541.1:151650791-151650809
TTGGAAAACGATGATGATGATGATGATGAC151650791AATGATGAGGGTAAAGATGTTGTTATTGTTGATGCTGATGAACTTGATG
Sympetrum striolatum genome assembly, chromosome: 3.
OX388343.1:65320848-65320866
GAGGGAGGAAAAATTACTGAAGATCGAGGT65320848AATGATGAGGGTAAAGATGGTCCAAACTCGGATTAGGGTGAAGGAATTG
Eupeodes luniger genome assembly, chromosome: 1.
OX608073.1:145136419-145136437
GATGAAAATCATTTAAGTTTCTTTTTGAAG145136419AATGATGAGGGTAAAGATGATCAGCGCTATCAGATGTTATATTGATGTA
Cheilosia scutellata genome assembly, chromosome: 3.
OY015313.1:22381597-22381615
TTTGTTGCCGCCCTTGGCGCTGAAGCTGAG22381597AATGATGAGGGTAAAGATGGCCACTAGGAGCGGACTGAAGATGACGATG
Onchidella celtica genome assembly, chromosome: 18.
OZ007584.1:26204374-26204392
TTGAAGAAAGGATTGTCTATCGACAGCACC26204374AATGATGAGGGTAAAGATGGTGGAAGAACACGATGTTCAGTTTATGCGT
Chionomys nivalis genome assembly, chromosome: 4.
OX465452.1:70508877-70508895
CCAAGAAACCCTTTGTAACTTGAAGCCCAA70508877CATCTTTACCCTCATCATTTTGTCTTGGAGGAGATTCAGACATTGGCTT
Podarcis lilfordi genome assembly, chromosome: 6.
OX395131.1:66681832-66681850
AATAGCCTCGTCCTTGTATACCTGAAGGAA66681832CATCTTTACCCTCATCATTCAGACAAGACACTGAGGTCCAGTTCTGAGG
Scomber scombrus genome assembly, chromosome: 4.
OY829921.1:24976841-24976859
CCTTTCTTTCCAGTTTCTACCAACCTTTTT24976841CATCTTTACCCTCATCATTTTAAGTACCACAAAGAGGCCAGGTCATGAG
Nannobrachium achirus genome assembly, chromosome: 4.
OY997641.1:59579059-59579077
AGGCTACTGCTTAACCTTCCATCTCAGACT59579059CATCTTTACCCTCATCATTTTAAAAGGGTGGGTTGACTCAGGATAGTTG
Nannobrachium achirus genome assembly, chromosome: 4.
OY997641.1:59593982-59594000
CCTGTTTTGCTTAACCTTCCATCTCGGACT59593982CATCTTTACCCTCATCATTTTCAAAGCGTGAGTTTGCTCAGGGTAGTTG
Nannobrachium achirus genome assembly, chromosome: 4.
OY997641.1:59893747-59893765
CCTGTTTTGCTTAACCTTCCATCTCGGACT59893747CATCTTTACCCTCATCATTTTCAAAGCGTGAGTTTGCTCAGGGTACACA
Sambucus nigra genome assembly, chromosome: 14.
OX422220.1:308851326-308851344
TAACACTCACCGATAAGTCCTAGTGGTATT308851326CATCTTTACCCTCATCATTGGGCCAATTAAATGTAATTTCGAGTTCCCA
Arachnomyces peruvianus genome assembly, chromosome: 3.
OX453234.1:544751-544769
GTTCCTCTTTCTCTTTGCTTTCATCGTCTT544751CATCTTTACCCTCATCATTACCGTTCCTCCATCTTCTATTCACCGCTAT
Citrus sinensis genome assembly, chromosome: 2.
OY754319.1:2033935-2033953
AAGATTTTCGGGTCGCCCGGCACAAATTTA2033935CATCTTTACCCTCATCATTCATAAAAATAACTGAAGTAAGTATCTTAAC
Geranium rotundifolium genome assembly, chromosome: 2.
OY987312.1:38475197-38475215
GGATTTTGAGGCTGATAGCTTTCGAGCGAT38475197CATCTTTACCCTCATCATTGCTCGTAATTTGGATGCAGATGGTATGCGT
Dryas octopetala genome assembly, chromosome: 6.
OY992837.1:4625993-4626011
TAAGCCCACCTAGACCTCCACCCGTCTCTT4625993CATCTTTACCCTCATCATTGCCTATGCTTCTCTGCTCTTTATCAACTTC
Sphingobacterium sp. SRCM116780 chromosome, complete genome.
CP090446.1:1877727-1877745
CTGAGGGACTCCATTTACCTCTAAAACTTC1877727CATCTTTACCCTCATCATTTGAAGGTGAAAAAATGTGTGCAGTCTGCCC
4_Tte_b3v08.
OE009506.1:13938-13956
TCTTTTCCAGATTTTCCGCCATTTCATCCA13938CATCTTTACCCTCATCATTGATTTCTCCCATTTTCTCCTTTATTAATCT
Sphaerophoria taeniata genome assembly, chromosome: 1.
OX016540.1:94309381-94309399
CATCAAGTTCATCAGCATCAACAATAACAA94309381CATCTTTACCCTCATCATTGTCATCATCATCATCATCATCGTTTTCCAA
Sphaerophoria taeniata genome assembly, chromosome: 1.
OX016540.1:136416726-136416744
CATCAAGTTCATCAGCATCAACAATAACAA136416726CATCTTTACCCTCATCATTGTCATTATCATCATCATCATCGTTTTCCAA
Sphaerophoria taeniata genome assembly, chromosome: 1.
OX016540.1:142151584-142151602
CATCAAGTTCATCAGCATCAACAATAACAA142151584CATCTTTACCCTCATCATTGTCATCATCATCATCATCATCGTTTTCCAA
Sphaerophoria taeniata genome assembly, chromosome: 1.
OX016540.1:168218381-168218399
CATCAAGTTCATCAGCATCAACAATAACAA168218381CATCTTTACCCTCATCATTGTCACTATCATCATCATCATCGTTTTCCAA
Sphaerophoria taeniata genome assembly, chromosome: 3.
OX016542.1:109161520-109161538
CATCAAGTTCATCAGCATCAACAATAACAA109161520CATCTTTACCCTCATCATTGTCATTATCATCATCATCATCGTTTTCCAA
Sphaerophoria taeniata genome assembly, chromosome: X.
OX016543.1:5412971-5412989
CATCAAGTTCATCAGCATCAACAATAACAA5412971CATCTTTACCCTCATCATTGTCATTATCATCATCATCATCGTTTTCCAA
Cheilosia soror genome assembly, chromosome: 3.
OX403636.1:77426897-77426915
CATCGTCATCTTCAGTCCGCTCCTAGTGGC77426897CATCTTTACCCTCATCATTCTCAGCTTCAGCGCCAAGGGTGGCAACAAA
Cheilosia impressa genome assembly, chromosome: 3.
OX411882.1:42541097-42541115
CATCGTCATCTTCAGTCCGCTTCTCGTGGC42541097CATCTTTACCCTCATCATTCTCAGCTTCAGCGCCAAGGGTGGCAACAAA
Eupithecia subumbrata genome assembly, chromosome: 17.
OX438632.1:9178144-9178162
TAGATGCCGAATCGATACAAGTATTAGTGC9178144CATCTTTACCCTCATCATTCATTCTACATCCGTACTCAGGTATCTGCCT
Cheilosia soror genome assembly, chromosome: 3.
OX443563.1:80350453-80350471
CATCGTCATCTTCAGTCCGCTCCTAGTGGC80350453CATCTTTACCCTCATCATTCTCAGCTTCAGCGCCAAGGGTGGCAACAAA
Cheilosia variabilis genome assembly, chromosome: 2.
OX579677.1:52265653-52265671
CATCGTCATCTTCAGTCCGCTTCTAGTGGC52265653CATCTTTACCCTCATCATTCTCAGCTTCAGCGCCAAGGGTGGCAACAAA
Spongia officinalis genome assembly, chromosome: 1.
OZ005746.1:10109693-10109711
GGCACACTCAGAGCGGTGGACACTTTTGTA10109693CATCTTTACCCTCATCATTTACGTGTTCCTCATCTTTATCTCCAGCATG
Sepia lycidas genome assembly, chromosome: 34.
OZ010604.1:63815315-63815333
CAGGGATGATAGAAAAGAAGGATATTTCAT63815315CATCTTTACCCTCATCATTATAAAAATGACCCTTCCACCACAAGACAAT
Pimpla rufipes genome assembly, chromosome: 5.
OZ010634.1:18379192-18379210
TTTTTGTTTATCTATGCAGCCTTGTGGAAT18379192CATCTTTACCCTCATCATTTTTACAATTCACGTAATGCAGGATTTTTAC
Tenebrio molitor genome assembly, chromosome: 9.
OZ014546.1:13858093-13858111
CTTCACTCACTAAAGTTGTAATTAAAGCAT13858093CATCTTTACCCTCATCATTCTCATCATCACTCTGCACTTCAATTATAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AATGATGAGGGTAAAGATG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AATGATGAGGGTAAAGATG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.186 | 0.177 | search_plus_done; http://172.18.8.135:50400/match?q=AATGATGAGGGTAAAGATG&k=0&no_gap=0&offset=0&limit=50
0.306 | 0.120 | search_minus_done; http://172.18.8.135:50400/match?q=CATCTTTACCCTCATCATT&k=0&no_gap=0&offset=0&limit=26
0.324 | 0.018 | cgi_end;

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