GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 05:13:37, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Sambucus nigra genome assembly, chromosome: 8.
OX422214.1:43214950-43214970
GGATTTAAAGACACCCAATTTGGTACATGA43214950AATGCAGGGTTTCAAGTGTGTCACTCTCTTGGAGGTGGAATGGGATCTGGA
Sambucus nigra genome assembly, chromosome: 6.
OX422212.1:342262724-342262744
TCCAGATCCCGTTCCACCTCCAAGAGAGTG342262724ACACACTTGAAACCCTGCATTTCATGTACCAAATTGGGCGTCTTTAAAACC
Sambucus nigra genome assembly, chromosome: 11.
OX422217.1:323243156-323243176
TCCAGATCCCATTCCACCTCCAAGAGAGTG323243156ACACACTTGAAACCCTGCATTTCATGTACCAAATTGGGCGTCTTTAAAGCC
Sambucus nigra genome assembly, chromosome: 15.
OX422221.1:184896472-184896492
TAGAGTTCCCATTCCATCTCCAAGAGAGTG184896472ACACACTTGAAACCCTGCATTTCATGTACCAAATTAGGCGTCATTAAATCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AATGCAGGGTTTCAAGTGTGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AATGCAGGGTTTCAAGTGTGT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.086 | 0.078 | search_plus_done; http://172.18.8.135:50400/match?q=AATGCAGGGTTTCAAGTGTGT&k=0&no_gap=0&offset=0&limit=50
0.099 | 0.012 | search_minus_done; http://172.18.8.135:50400/match?q=ACACACTTGAAACCCTGCATT&k=0&no_gap=0&offset=0&limit=49
0.100 | 0.002 | cgi_end;

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