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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2026-03-04 16:46:40, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Pyrus communis mRNA, clone: DEG-A64-36, isolated by differential display in spermidine synthase transgenic pear.
AB572919.1:50-69
CTATAAAGCAGGAGTTTTTATTGGTACAAT50AATGCGAGCTGGATACACACATACAGCCACTAATAGATATCAACATTTGC
Mdlv2_4018a13.y1 Mdlv2 Malus domestica cDNA clone Mdlv2_4018a13 5' similar to TR:O23950 O23950 ENDO-XYLOGLUCAN TRANSFERASE, mRNA sequence.
CV523974.1:8-27
GTACAAT8AATGCGAGCTGGATACACACATACAGCCACTAATAGATATCGACATTTGC
Mdlv2_4022f06.y1 Mdlv2 Malus domestica cDNA clone Mdlv2_4022f06 5' similar to TR:O23950 O23950 ENDO-XYLOGLUCAN TRANSFERASE, mRNA sequence.
CV655761.1:116-135
CTATAAAGCAGGAGCTTTTATTGGTACAAT116AATGCGAGCTGGATACACACATACAGCCACTAATAGATATCGACATTTGC
Mdlr7002E21.g1 Apple_EST_Mdlr Malus domestica cDNA similar to pir|T09870 probable endo-xyloglucan transferase - upland cotton (fragment) dbj|BAA21107.1| endo-xyloglucan transferase [Gossypium hirsutum
DR989806.1:57-76
CTATAAAGCAGGAGCTTTTATTGGTACAAT57AATGCGAGCTGGATACACACATACAGCCACTAATAGATATCGACATTTGC
Mdas9003P09.g1 Apple_EST_Mdas Malus domestica cDNA similar to ref|NP_569019.1| xyloglucan endotransglycosylase, putative [Arabidopsis thaliana] gb|AAL09803.1| AT5g65730/MPA24_8 [Arabidopsis thaliana]
DR993669.1:60-79
ACAATAACGCAGGAGCTTTATTGGTACAAT60AATGCGAGCTGGATACACACACATACAGCCACTAATAGATATCGACATTT
Mdfrs3135H05.g1 Apple_EST_Mdfrs Malus domestica cDNA 5' similar to ref|NP_569019.1| xyloglucan endotransglycosylase, putative [Arabidopsis thaliana] gb|AAL09803.1| AT5g65730/MPA24_8 [Arabidopsis thali
DY256361.1:29-48
AATAACGCAGGAGCTTTATTGGTACAAT29AATGCGAGCTGGATACACACACATACAGCCACTAATAAATATCGACATTT
030707ABOC002623HT (ABOC) Crab apple mature fruit Malus sieboldii cDNA clone ABOCC00262, mRNA sequence.
EE663893.1:57-76
CTATAAAGCAGGAGCTTTTATTGGTACAAT57AATGCGAGCTGGATACACACATACAGCCACTAATAGATATCGACATTTGC
Mdfwb2095B12_e19961.g1 Apple_EST_Mdfwb Malus domestica cDNA 5' similar to pir|T09870 probable endo-xyloglucan transferase - upland cotton (fragment) dbj|BAA21107.1| endo-xyloglucan transferase [Gossyp
GO545236.1:58-77
CTATAAAGCAGGAGCTTTTATTGGTACAAT58AATGCGAGCTGGATACACACATACAGCCACTAATAGATATCGACATTTGC
Mdlv4001H16_e1781.b1 Mdlv Malus domestica cDNA 3', mRNA sequence.
GO554463.1:94-113
ACAATAACGCAGGAGCTTTATTGGTACAAT94AATGCGAGCTGGATACACACACATACAGCCACTAATAAATATCGACATTT
Mdstw6031J14_e32599.g1 Apple_EST_Mdstw Malus domestica cDNA 5' similar to pir|D49539 xyloglucan endo-1,4-beta-D-glucanase (EC 3.2.1.-) - tomato dbj|BAA03923.1| endo-xyloglucan transferase [Lycopersico
GO555493.1:89-108
CTATAAAGCAGGAGCTTTTATTGGTACAAT89AATGCGAGCTGGATACACACATACAGCCACTAATAGATAATCGACATTTG
Mdstw6027P23_e32102.g1 Apple_EST_Mdstw Malus domestica cDNA 5' similar to ref|NP_569019.1| xyloglucan endotransglycosylase, putative [Arabidopsis thaliana] gb|AAL09803.1| AT5g65730/MPA24_8 [Arabidopsi
GO555591.1:80-99
CTATAAAGCAGGAGCTTTTATTGGTACAAT80AATGCGAGCTGGATACACACATACAGCCACTAATAAATATCGACATTTGC
Mdfwg2106L21_e22102.g1 Apple_EST_Mdfwg Malus domestica cDNA 5' similar to ref|NP_569019.1| xyloglucan endotransglycosylase, putative [Arabidopsis thaliana] gb|AAL09803.1| AT5g65730/MPA24_8 [Arabidopsi
GO558352.1:57-76
ACAATAACGCAGGAGCTTTATTGGTACAAT57AATGCGAGCTGGATACACACACATACAGCCACTAATAGATATCGACATTT
Mdlv2_4026P11_e27473.b1 Mdlv2 Malus domestica cDNA 3' similar to ref|NP_569019.1| xyloglucan endotransglycosylase, putative [Arabidopsis thaliana] gb|AAL09803.1| AT5g65730/MPA24_8 [Arabidopsis thalian
GO562637.1:39-58
ACAATAACGCAGGAGCTTTATTGGTACAAT39AATGCGAGCTGGATACACACACATACAGCCACTAATAGATATCGACATTT
Pyrus pyrifolia mRNA, clone: NFW3_04_32, 3' end sequence, expressed in flower.
HX744051.1:42-61
GCAATAACGCAGGAGCTTTATTGGTACAAT42AATGCGAGCTGGATACACACACATACAGCCACTAATAGATATCGGCATTT
Pyrus pyrifolia mRNA, clone: NLE2_29_66, 5' end sequence, expressed in leaf.
HX769066.1:36-55
ACAATAACGCACGAGCTTTATTGGTACAAT36AATGCGAGCTGGATACACACACATACAGCCACTAATAGATATCGGCATTT
TSA: Pyrus x bretschneideri Unigene41359_XinShao mRNA sequence.
JR632981.1:87-106
ACAATAACGCACGAGCTTTATTGGTACAAT87AATGCGAGCTGGATACACACACATACAGCCACTAATAGATATCGGCATTT
Malus hybrid cultivar cultivar Flame chromosome 2.
CP141911.1:18623464-18623483
CTATAAAGCAGGAGCTTTTATTGGTACAAT18623464AATGCGAGCTGGATACACACATACAGCCACTAATAGATATCGACATTTGC
Malus hybrid cultivar cultivar Flame chromosome 2.
CP141928.1:20536005-20536024
CTATAAAGCAGGAGCTTTTATTGGTACAAT20536005AATGCGAGCTGGATACACACATACAGCCACTAATAGATATCGACATTTGC
Malus hybrid cultivar cultivar SH6 chromosome 15.
CP143372.1:29329096-29329115
ACAATAACGCAGGAGCTTTATTGGTACAAT29329096AATGCGAGCTGGATACACACACATACAGCCACTAATAGATATCGACATTT
Malus hybrid cultivar cultivar SH6 chromosome 2.
CP143376.1:16751630-16751649
ACATAAAGCAGGAGCTTTTATTGGTACAAT16751630AATGCGAGCTGGATACACACATACAGCCCCTAATAGATATCGACATTTGC
Malus domestica cultivar Red Fuji chromosome 2.
CP147794.1:20505796-20505815
CTATAAAGCAGGAGCTTTTATTGGTACAAT20505796AATGCGAGCTGGATACACACATACAGCCACTAATAGATATCGACATTTGC
Malus domestica cultivar Red Fuji chromosome 15.
CP147807.1:21482860-21482879
ACAATAACGCAGGAGCTTTATTGGTACAAT21482860AATGCGAGCTGGATACACACACATACAGCCACTAATAGATATCGACATTT
Malus domestica cultivar Red Fuji chromosome 15.
CP147816.1:20547509-20547528
ACAATAACGCAGGAGCTTTATTGGTACAAT20547509AATGCGAGCTGGATACACACACATACAGCCACTAATAGATATCGACATTT
Malus domestica cultivar Red Fuji chromosome 2.
CP147819.1:21251926-21251945
CTATAAAGCAGGAGCTTTTATTGGTACAAT21251926AATGCGAGCTGGATACACACATACAGCCACTAATAGATATCGACATTTGC
Malus ioensis cultivar PI590015 chromosome 2.
CP154725.1:15831688-15831707
CTATAAAGCAGGAGCTTTTATTGGTACAAT15831688AATGCGAGCTGGATACACACATACAGCCACTCATAGACATCGACATTTGC
Malus ioensis cultivar PI590015 chromosome 2.
CP154742.1:17126957-17126976
CTATAAAGCAGGAGCTTTTATTGGTACAAT17126957AATGCGAGCTGGATACACACATACAGCCACTCATAGACATCGACATTTGC
Malus coronaria cultivar PI590014 chromosome 2.
CP154759.1:17080924-17080943
CTATAAAGCAGGAGCTTTTATTGGTACAAT17080924AATGCGAGCTGGATACACACATACAGCCACTCATAGACATCGACATTTGC
Malus coronaria cultivar PI590014 chromosome 2.
CP154776.1:17197472-17197491
CTATAAAGCAGGAGCTTTTATTGGTACAAT17197472AATGCGAGCTGGATACACACATACAGCCACTCATAGACATCGACATTTGC
Chaenomeles sinensis isolate sampleA chromosome 07.
CP162370.1:15299722-15299741
CTATGAAGCAGGAGCTTTTATTGGTACAAT15299722AATGCGAGCTGGATACACACATACAGCCACTAATAGATATCGACATTTTG
Malus domestica cultivar WA 38 chromosome 15B.
CP165698.1:29503109-29503128
ACAATAACGCAGGAGCTTTATTGGTACAAT29503109AATGCGAGCTGGATACACACACATACAGCCACTAATAGATATCGACATTT
Malus domestica cultivar WA 38 chromosome 15A.
CP165715.1:29370948-29370967
ACAATAACGCAGGAGCTTTATTGGTACAAT29370948AATGCGAGCTGGATACACACACATACAGCCACTAATAGATATCGACATTT
Malus domestica cultivar Golden Delicious chromosome 15.
CP168779.1:28804999-28805018
ACAATAACGCAGGAGCTTTATTGGTACAAT28804999AATGCGAGCTGGATACACACACATACAGCCACTAATAGATATCGACATTT
Malus domestica cultivar Golden Delicious chromosome 15.
CP168796.1:29130739-29130758
ACAATAACGCAGGAGCTTTATTGGTACAAT29130739AATGCGAGCTGGATACACACACATACAGCCACTAATAGATATCGACATTC
Malus sylvestris genome assembly, chromosome: 15.
OU696517.1:28781780-28781799
ACAATAACGCAGGAGCTTTATTGGTACAAT28781780AATGCGAGCTGGATACACACACATACAGCCACTAATAGATATCGACATTT
Malus domestica genome assembly, chromosome: 15.
OU696691.1:29459016-29459035
ACAATAACGCAGGAGCTTTATTGGTACAAT29459016AATGCGAGCTGGATACACACACATACAGCCACTAATAGATATCGACATTT
Malus domestica genome assembly, chromosome: 15.
OU744556.1:29197952-29197971
ACAATAACGCAGGAGCTTTATTGGTACAAT29197952AATGCGAGCTGGATACACACACATACAGCCACTAATAGATATCGACATTT
Malus domestica genome assembly, chromosome: 15.
OU744967.1:29398476-29398495
ACAATAACGCAGGAGCTTTATTGGTACAAT29398476AATGCGAGCTGGATACACACACATACAGCCACTAATAGATATCGACATTT
Malus domestica genome assembly, chromosome: 15.
OU745005.1:29158683-29158702
ACAATAACGCAGGAGCTTTATTGGTACAAT29158683AATGCGAGCTGGATACACACACATACAGCCACTAATAGATATCGACATTT
Malus x robusta genome assembly, chromosome: 7.
OY720331.1:19562837-19562856
CTATAAAGCAGGAGCTTTTATTGGTAGAAT19562837AATGCGAGCTGGATACACACATACAGCCACTAATAGATATCGACATTTGC
Pyrus communis genome assembly, chromosome: 1.
OY757068.1:21774830-21774849
ACAATAACGCAGGAGCTTTATTGATACAAT21774830AATGCGAGCTGGATACACACACATACAGCCACTAATAGATATCGGCATTT
Pyrus communis genome assembly, chromosome: 10.
OY757077.1:13131749-13131768
CTATAAAGCAGGAGTTTTTATTGGTACAAT13131749AATGCGAGCTGGATACACACATACAGCCACTAATAGATATCGACATTTGC
Karpatiosorbus bristoliensis genome assembly, chromosome: 1C.
OZ287405.1:24398582-24398601
ACAATAACGCAGGAGCTTTATTGGTACAAT24398582AATGCGAGCTGGATACACACACATACAGCCACTAATAGATATCGACATTT
Karpatiosorbus bristoliensis genome assembly, chromosome: 7C.
OZ287411.1:14816130-14816149
CTATAAAGCAGGAGCTTTTATTGGTACAAT14816130AATGCGAGCTGGATACACACATACAGCCACTAATAGATATCGACATTTGC
Karpatiosorbus bristoliensis genome assembly, chromosome: 1B.
OZ287442.1:26404677-26404696
ACAATAATGCAGGAGCTTTATTGGTACAAT26404677AATGCGAGCTGGATACACACACATACAGCCACTAATAGATATCGACATTT
Karpatiosorbus bristoliensis genome assembly, chromosome: 7A.
OZ287453.1:15201375-15201394
CTATAAAGCAGGAGCTTTTATTGGTACAAT15201375AATGCGAGCTGGATACACACATACAGCCACTAATAGATATCGACATTTGC
Karpatiosorbus bristoliensis genome assembly, chromosome: 7B.
OZ287454.1:17372454-17372473
CTATAAAGCAGGAGCTTTTATTGGTACAAT17372454AATGCGAGCTGGATACACACATACAGCCACTAATAGATATCGACATTTGC
Idaea aversata genome assembly, chromosome: 16.
OU026099.1:252846-252865
GCTAGGACATAAAATGGACAAAGTATGCTC252846AATGCGAGCTGGATACACACTGATAGCAGAGGTCTGACTTACCTGATGCT
Mdfw2064g08.y1 Mdfw Malus domestica cDNA clone Mdfw2064g08 5' similar to TR:O23950 O23950 ENDO-XYLOGLUCAN TRANSFERASE, mRNA sequence.
CO067253.1:533-552
GCAAATGTCGATATCTATTAGTGGCTGTAT533GTGTGTATCCAGCTCGCATTATTGTA
Mdfrt3029c05.y1 Mdfrt Malus domestica cDNA clone Mdfrt3029c05 5' similar to TR:O49542 O49542 ENDOXYLOGLUCAN TRANFERASE-LIKE PROTEIN, mRNA sequence.
CO068110.1:364-383
AAATGTCGATATCTATTAGTGGCTGTATGT364GTGTGTATCCAGCTCGCATTATTGTACCAATAAAGCTCCTGCGTTATTGT
Mdfrt3029m19.y1 Mdfrt Malus domestica cDNA clone Mdfrt3029m19 5' similar to TR:O23950 O23950 ENDO-XYLOGLUCAN TRANSFERASE, mRNA sequence.
CO068169.1:423-442
AAATGTCGATATCTATTANTGGCTGTATGT423GTGTGTATCCAGCTCGCATTATTGTACCAATAAAGCTCCTGCGTTATTGT
TSA: Pyrus pyrifolia mRNA, contig: contig_10420.
FX413325.1:223-242
AAATGCCGATATCTATTAGTGGCTGTATGT223GTGTGTATCCAGCTCGCATTATTGTACCAATAAAGCTCCTGCGTTATTGT
TSA: Pyrus pyrifolia mRNA, contig: contig_884revcomp.
FX415501.1:194-213
AAATGCCGATATCTATTAGTGGCTGTATGT194GTGTGTATCCAGCTCGCATTATTGTACCAATAAAGCTCGTGC
TSA: Pyrus communis mRNA, contig: lc1684.
FX610271.1:1016-1035
AAATGCCGATATCTATTAGTGGCTGTATGT1016GTGTGTATCCAGCTCGCATTATTGTATCAATAAAGCTCCTGCGTTATTGT
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141924.1:24624266-24624285
AAATGTCGATATCTATTAGTGGCTGTATGT24624266GTGTGTATCCAGCTCGCATTATTGTACCAATAAAGCTCCTGCGTTATTGT
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141941.1:27078235-27078254
AAATGTCGATATCTATTAGTGGCTGTATGT27078235GTGTGTATCCAGCTCGCATTATTGTACCAATAAAGCTCCTGCGTTATTGT
Malus hybrid cultivar cultivar Royalty chromosome 2.
CP141954.1:16670441-16670460
GCAAATGTCGATATCTATTAGTGGCTGTAT16670441GTGTGTATCCAGCTCGCATTATTCTACCAATAAAAGCTCCTGCTTTATAG
Malus sylvestris genome assembly, chromosome: 2.
OU696504.1:17356240-17356259
GCAAATGTCGATATCTATTAGTGGCTGTAT17356240GTGTGTATCCAGCTCGCATTATTGTACCAATAAAAGCTCCTGCTTTATAG
Malus domestica genome assembly, chromosome: 2.
OU696678.1:17610931-17610950
GCAAATGTCGATATCTATTAGTGGCTGTAT17610931GTGTGTATCCAGCTCGCATTATTGTACCAATAAAAGCTCCTGCTTTATAG
Malus domestica genome assembly, chromosome: 2.
OU744543.1:17651136-17651155
GCAAATGTCGATATCTATTAGTGGCTGTAT17651136GTGTGTATCCAGCTCGCATTATTGTACCAATAAAAGCTCCTGCTTTATAG
Malus x robusta genome assembly, chromosome: 1.
OY720325.1:24365203-24365222
AAATGTCGATATCTATTAGTGGCTGTATGT24365203GTGTGTATCCAGCTCGCATTATTGTACCAATAAAGCTCCTGCGTTATTGT
Crataegus laevigata genome assembly, chromosome: 1.
OY756938.1:24533887-24533906
AAATGTCGATATCTATTAGTAGCTGTATGT24533887GTGTGTATCCAGCTCGCATTATTGTACCAATAAAGCTCCTGCGTTATTGT
Karpatiosorbus bristoliensis genome assembly, chromosome: 1A.
OZ287441.1:18546167-18546186
AAATGTCGATATCTATTAGTGGCTGTATGT18546167GTGTGTATCCAGCTCGCATTATTGTACCAATAAAGCTCCTGCGTTATTGT
Idaea aversata genome assembly, chromosome: 16.
OU026099.1:796300-796319
AGCATCAGGTAAGTCAGACCTCTGCTATCA796300GTGTGTATCCAGCTCGCATTGAGCATACTTTGTCCATTGTATGCCCTAGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AATGCGAGCTGGATACACAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AATGCGAGCTGGATACACAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.469 | 1.460 | search_plus_done; http://172.18.8.135:50900/match?q=AATGCGAGCTGGATACACAC&k=0&no_gap=0&offset=0&limit=50
1.954 | 0.485 | search_minus_done; http://172.18.8.135:50900/match?q=GTGTGTATCCAGCTCGCATT&k=0&no_gap=0&offset=0&limit=3
1.965 | 0.011 | cgi_end;

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