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2025-04-11 18:48:45, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Pyrus communis mRNA, clone: DEG-A64-36, isolated by differential display in spermidine synthase transgenic pear.
AB572919.1:50-69
CTATAAAGCAGGAGTTTTTATTGGTACAAT50AATGCGAGCTGGATACACACATACAGCCACTAATAGATATCAACATTTGC
Mdlv2_4018a13.y1 Mdlv2 Malus domestica cDNA clone Mdlv2_4018a13 5' similar to TR:O23950 O23950 ENDO-XYLOGLUCAN TRANSFERASE, mRNA sequence.
CV523974.1:8-27
GTACAAT8AATGCGAGCTGGATACACACATACAGCCACTAATAGATATCGACATTTGC
Mdlv2_4022f06.y1 Mdlv2 Malus domestica cDNA clone Mdlv2_4022f06 5' similar to TR:O23950 O23950 ENDO-XYLOGLUCAN TRANSFERASE, mRNA sequence.
CV655761.1:116-135
CTATAAAGCAGGAGCTTTTATTGGTACAAT116AATGCGAGCTGGATACACACATACAGCCACTAATAGATATCGACATTTGC
Mdlr7002E21.g1 Apple_EST_Mdlr Malus domestica cDNA similar to pir|T09870 probable endo-xyloglucan transferase - upland cotton (fragment) dbj|BAA21107.1| endo-xyloglucan transferase [Gossypium hirsutum
DR989806.1:57-76
CTATAAAGCAGGAGCTTTTATTGGTACAAT57AATGCGAGCTGGATACACACATACAGCCACTAATAGATATCGACATTTGC
Mdas9003P09.g1 Apple_EST_Mdas Malus domestica cDNA similar to ref|NP_569019.1| xyloglucan endotransglycosylase, putative [Arabidopsis thaliana] gb|AAL09803.1| AT5g65730/MPA24_8 [Arabidopsis thaliana]
DR993669.1:60-79
ACAATAACGCAGGAGCTTTATTGGTACAAT60AATGCGAGCTGGATACACACACATACAGCCACTAATAGATATCGACATTT
Mdfrs3135H05.g1 Apple_EST_Mdfrs Malus domestica cDNA 5' similar to ref|NP_569019.1| xyloglucan endotransglycosylase, putative [Arabidopsis thaliana] gb|AAL09803.1| AT5g65730/MPA24_8 [Arabidopsis thali
DY256361.1:29-48
AATAACGCAGGAGCTTTATTGGTACAAT29AATGCGAGCTGGATACACACACATACAGCCACTAATAAATATCGACATTT
030707ABOC002623HT (ABOC) Crab apple mature fruit Malus sieboldii cDNA clone ABOCC00262, mRNA sequence.
EE663893.1:57-76
CTATAAAGCAGGAGCTTTTATTGGTACAAT57AATGCGAGCTGGATACACACATACAGCCACTAATAGATATCGACATTTGC
Mdfwb2095B12_e19961.g1 Apple_EST_Mdfwb Malus domestica cDNA 5' similar to pir|T09870 probable endo-xyloglucan transferase - upland cotton (fragment) dbj|BAA21107.1| endo-xyloglucan transferase [Gossyp
GO545236.1:58-77
CTATAAAGCAGGAGCTTTTATTGGTACAAT58AATGCGAGCTGGATACACACATACAGCCACTAATAGATATCGACATTTGC
Mdlv4001H16_e1781.b1 Mdlv Malus domestica cDNA 3', mRNA sequence.
GO554463.1:94-113
ACAATAACGCAGGAGCTTTATTGGTACAAT94AATGCGAGCTGGATACACACACATACAGCCACTAATAAATATCGACATTT
Mdstw6031J14_e32599.g1 Apple_EST_Mdstw Malus domestica cDNA 5' similar to pir|D49539 xyloglucan endo-1,4-beta-D-glucanase (EC 3.2.1.-) - tomato dbj|BAA03923.1| endo-xyloglucan transferase [Lycopersico
GO555493.1:89-108
CTATAAAGCAGGAGCTTTTATTGGTACAAT89AATGCGAGCTGGATACACACATACAGCCACTAATAGATAATCGACATTTG
Mdstw6027P23_e32102.g1 Apple_EST_Mdstw Malus domestica cDNA 5' similar to ref|NP_569019.1| xyloglucan endotransglycosylase, putative [Arabidopsis thaliana] gb|AAL09803.1| AT5g65730/MPA24_8 [Arabidopsi
GO555591.1:80-99
CTATAAAGCAGGAGCTTTTATTGGTACAAT80AATGCGAGCTGGATACACACATACAGCCACTAATAAATATCGACATTTGC
Mdfwg2106L21_e22102.g1 Apple_EST_Mdfwg Malus domestica cDNA 5' similar to ref|NP_569019.1| xyloglucan endotransglycosylase, putative [Arabidopsis thaliana] gb|AAL09803.1| AT5g65730/MPA24_8 [Arabidopsi
GO558352.1:57-76
ACAATAACGCAGGAGCTTTATTGGTACAAT57AATGCGAGCTGGATACACACACATACAGCCACTAATAGATATCGACATTT
Mdlv2_4026P11_e27473.b1 Mdlv2 Malus domestica cDNA 3' similar to ref|NP_569019.1| xyloglucan endotransglycosylase, putative [Arabidopsis thaliana] gb|AAL09803.1| AT5g65730/MPA24_8 [Arabidopsis thalian
GO562637.1:39-58
ACAATAACGCAGGAGCTTTATTGGTACAAT39AATGCGAGCTGGATACACACACATACAGCCACTAATAGATATCGACATTT
Pyrus pyrifolia mRNA, clone: NFW3_04_32, 3' end sequence, expressed in flower.
HX744051.1:42-61
GCAATAACGCAGGAGCTTTATTGGTACAAT42AATGCGAGCTGGATACACACACATACAGCCACTAATAGATATCGGCATTT
Pyrus pyrifolia mRNA, clone: NLE2_29_66, 5' end sequence, expressed in leaf.
HX769066.1:36-55
ACAATAACGCACGAGCTTTATTGGTACAAT36AATGCGAGCTGGATACACACACATACAGCCACTAATAGATATCGGCATTT
TSA: Pyrus x bretschneideri Unigene41359_XinShao mRNA sequence.
JR632981.1:87-106
ACAATAACGCACGAGCTTTATTGGTACAAT87AATGCGAGCTGGATACACACACATACAGCCACTAATAGATATCGGCATTT
Malus hybrid cultivar cultivar Flame chromosome 2.
CP141911.1:18623464-18623483
CTATAAAGCAGGAGCTTTTATTGGTACAAT18623464AATGCGAGCTGGATACACACATACAGCCACTAATAGATATCGACATTTGC
Malus hybrid cultivar cultivar Flame chromosome 2.
CP141928.1:20536005-20536024
CTATAAAGCAGGAGCTTTTATTGGTACAAT20536005AATGCGAGCTGGATACACACATACAGCCACTAATAGATATCGACATTTGC
Malus hybrid cultivar cultivar SH6 chromosome 15.
CP143372.1:29329096-29329115
ACAATAACGCAGGAGCTTTATTGGTACAAT29329096AATGCGAGCTGGATACACACACATACAGCCACTAATAGATATCGACATTT
Malus hybrid cultivar cultivar SH6 chromosome 2.
CP143376.1:16751630-16751649
ACATAAAGCAGGAGCTTTTATTGGTACAAT16751630AATGCGAGCTGGATACACACATACAGCCCCTAATAGATATCGACATTTGC
Malus sylvestris genome assembly, chromosome: 15.
OU696517.1:28781780-28781799
ACAATAACGCAGGAGCTTTATTGGTACAAT28781780AATGCGAGCTGGATACACACACATACAGCCACTAATAGATATCGACATTT
Malus domestica genome assembly, chromosome: 15.
OU696691.1:29459016-29459035
ACAATAACGCAGGAGCTTTATTGGTACAAT29459016AATGCGAGCTGGATACACACACATACAGCCACTAATAGATATCGACATTT
Malus domestica genome assembly, chromosome: 15.
OU744556.1:29197952-29197971
ACAATAACGCAGGAGCTTTATTGGTACAAT29197952AATGCGAGCTGGATACACACACATACAGCCACTAATAGATATCGACATTT
Malus domestica genome assembly, chromosome: 15.
OU744967.1:29398476-29398495
ACAATAACGCAGGAGCTTTATTGGTACAAT29398476AATGCGAGCTGGATACACACACATACAGCCACTAATAGATATCGACATTT
Malus domestica genome assembly, chromosome: 15.
OU745005.1:29158683-29158702
ACAATAACGCAGGAGCTTTATTGGTACAAT29158683AATGCGAGCTGGATACACACACATACAGCCACTAATAGATATCGACATTT
Malus x robusta genome assembly, chromosome: 7.
OY720331.1:19562837-19562856
CTATAAAGCAGGAGCTTTTATTGGTAGAAT19562837AATGCGAGCTGGATACACACATACAGCCACTAATAGATATCGACATTTGC
Pyrus communis genome assembly, chromosome: 1.
OY757068.1:21774830-21774849
ACAATAACGCAGGAGCTTTATTGATACAAT21774830AATGCGAGCTGGATACACACACATACAGCCACTAATAGATATCGGCATTT
Pyrus communis genome assembly, chromosome: 10.
OY757077.1:13131749-13131768
CTATAAAGCAGGAGTTTTTATTGGTACAAT13131749AATGCGAGCTGGATACACACATACAGCCACTAATAGATATCGACATTTGC
Idaea aversata genome assembly, chromosome: 16.
OU026099.1:252846-252865
GCTAGGACATAAAATGGACAAAGTATGCTC252846AATGCGAGCTGGATACACACTGATAGCAGAGGTCTGACTTACCTGATGCT
Mdfw2064g08.y1 Mdfw Malus domestica cDNA clone Mdfw2064g08 5' similar to TR:O23950 O23950 ENDO-XYLOGLUCAN TRANSFERASE, mRNA sequence.
CO067253.1:533-552
GCAAATGTCGATATCTATTAGTGGCTGTAT533GTGTGTATCCAGCTCGCATTATTGTA
Mdfrt3029c05.y1 Mdfrt Malus domestica cDNA clone Mdfrt3029c05 5' similar to TR:O49542 O49542 ENDOXYLOGLUCAN TRANFERASE-LIKE PROTEIN, mRNA sequence.
CO068110.1:364-383
AAATGTCGATATCTATTAGTGGCTGTATGT364GTGTGTATCCAGCTCGCATTATTGTACCAATAAAGCTCCTGCGTTATTGT
Mdfrt3029m19.y1 Mdfrt Malus domestica cDNA clone Mdfrt3029m19 5' similar to TR:O23950 O23950 ENDO-XYLOGLUCAN TRANSFERASE, mRNA sequence.
CO068169.1:423-442
AAATGTCGATATCTATTANTGGCTGTATGT423GTGTGTATCCAGCTCGCATTATTGTACCAATAAAGCTCCTGCGTTATTGT
Mdfrt3050a20.y1 Mdfrt Malus domestica cDNA clone Mdfrt3050a20 5' similar to TR:O23950 O23950 ENDO-XYLOGLUCAN TRANSFERASE, mRNA sequence.
CO754285.1:477-496
GCAAATGTCNATATCTATTANTGGCTGTAT477GTGTGTATCCAGCTCGCATTATTGAACCAATAAAAGCTCCTGCTTTATAG
Mdfrt3073e22.y1 Mdfrt Malus domestica cDNA clone Mdfrt3073e22 5' similar to TR:O23950 O23950 ENDO-XYLOGLUCAN TRANSFERASE, mRNA sequence.
CV083934.1:418-437
AAATGTCGATATCTATTAGTGGCTGTATGT418GTGTGTATCCAGCTCGCATTATTGTACCAATAAAGCTCCTGCGTTATTGT
Mdfrt3077p04.y1 Mdfrt Malus domestica cDNA clone Mdfrt3077p04 5' similar to TR:O23950 O23950 ENDO-XYLOGLUCAN TRANSFERASE, mRNA sequence.
CV085375.1:418-437
AAATGTCGATATCTATTAGTGGCTGTATGT418GTGTGTATCCAGCTCGCATTATTGTACCAATAAAGCTCCTGCGTTATTGT
Mdlv4001h16.y1 Mdlv Malus domestica cDNA clone Mdlv4001h16 5', mRNA sequence.
CV122217.1:34-53
AAATGTCGATATCTATTAGTGGCTGTATGT34GTGTGTATCCAGCTCGCATTATTGTACCAATAAAGCTCCTGCGTTATTGT
Mdfrt3099a10.y1 Mdfrt Malus domestica cDNA clone Mdfrt3099a10 5' similar to TR:Q9T067 Q9T067 ENDO-XYLOGLUCAN TRANSFERASE-LIKE PROTEIN, mRNA sequence.
CV629134.1:363-382
GCAAATGTCGATATCTATTAGTGGCTGTAT363GTGTGTATCCAGCTCGCATTATTGTACCAATAAAAGCTCCTGCTTTATAG
Mdfrt3101e10.y1 Mdfrt Malus domestica cDNA clone Mdfrt3101e10 5' similar to TR:Q9T067 Q9T067 ENDO-XYLOGLUCAN TRANSFERASE-LIKE PROTEIN, mRNA sequence.
CV629487.1:363-382
GCAAATGTCGATATCTATTAGTGGCTGTAT363GTGTGTATCCAGCTCGCATTATTGTACCAATAAAAGCTCCTGCTTTATAG
Mdfrt3105g19.y1 Mdfrt Malus domestica cDNA clone Mdfrt3105g19 5' similar to TR:O23950 O23950 ENDO-XYLOGLUCAN TRANSFERASE, mRNA sequence.
CV630747.1:478-497
GCAAATGTCGATATCTATTAGTGGCTGTAT478GTGTGTATCCAGCTCGCATTATTGTACCAATAAAAGCTCCTGCTTTATAG
Mdfrt3105h07.y1 Mdfrt Malus domestica cDNA clone Mdfrt3105h07 5' similar to TR:Q9T067 Q9T067 ENDO-XYLOGLUCAN TRANSFERASE-LIKE PROTEIN, mRNA sequence.
CV630913.1:363-382
GCAAATGTCGATATCTATTAGTGGCTGTAT363GTGTGTATCCAGCTCGCATTATTGTACCAATAAAAGCTCCTGCTTTATAG
Mdlr7004C18.g1 Apple_EST_Mdlr Malus domestica cDNA similar to pir|T09870 probable endo-xyloglucan transferase - upland cotton (fragment) dbj|BAA21107.1| endo-xyloglucan transferase [Gossypium hirsutum
DR992744.1:532-551
GCAAATGTCGATATCTATTAGTGGCTGTAT532GTGTGTATCCAGCTCGCATTATTGTACCAATAAAAGCTCCTGCTTTATAG
021016ABCA004411HT (ABCA) Royal Gala fruit stored at 0.5 degrees C for 24 hours Malus domestica cDNA clone ABCA004411, mRNA sequence.
EB145949.1:448-467
AAATGTCGATATCTATTAGTGGCTGTATGT448GTGTGTATCCAGCTCGCATTATTGTACCAATAAAGCTCCTGCGTTATTGT
fl_04E04_CF8 Md_fruit-leaf_subtractive_cDNA_library Malus domestica cDNA, mRNA sequence.
GD255008.1:150-169
GAATGTCGATATCTATTAGTGGCTGTATGT150GTGTGTATCCAGCTCGCATTATTGT
Mdstw6027L22.g1 Apple_EST_Mdstw Malus domestica cDNA 5' similar to gb|AAD39086.1|AF093507_1 xyloglucan endo-transglycosylase-like protein [Medicago truncatula], mRNA sequence.
GO497613.1:623-642
GCAAATGTCGATATCTATTAGTGGCTGTAT623GTGTGTATCCAGCTCGCATTATTGTACCAATAAAAGCTCCTGCTTTATAG
Mdfrs3141O05.g1 Apple_EST_Mdfrs Malus domestica cDNA 5' similar to ref|NP_569019.1| xyloglucan endotransglycosylase, putative [Arabidopsis thaliana] gb|AAL09803.1| AT5g65730/MPA24_8 [Arabidopsis thali
GO519720.1:520-539
GAATGTCGATATCTATTAGTGGCTGTATGT520GTGTGTATCCAGCTCGCATTATTGTACCAATAAAGCTCCTGCGTTATTGT
Pyrus pyrifolia mRNA, clone: NFW3_04_32, 5' end sequence, expressed in flower.
HX765219.1:708-727
AAATGCCGATATCTATTAGTNNCTGTATGT708GTGTGTATCCAGCTCGCATTATTGTACCAATAAAGCTCCTGCG
Md-59 Granny Smith apple skin coloration supression substractive hybridization cDNA library Malus domestica cDNA, mRNA sequence.
JK750371.1:150-169
AAATGTCGATATCTATTAGTGGCTGTATGT150GTGTGTATCCAGCTCGCATTATTGT
TSA: Pyrus pyrifolia mRNA, contig: contig_10420.
FX413325.1:223-242
AAATGCCGATATCTATTAGTGGCTGTATGT223GTGTGTATCCAGCTCGCATTATTGTACCAATAAAGCTCCTGCGTTATTGT
TSA: Pyrus pyrifolia mRNA, contig: contig_884revcomp.
FX415501.1:194-213
AAATGCCGATATCTATTAGTGGCTGTATGT194GTGTGTATCCAGCTCGCATTATTGTACCAATAAAGCTCGTGC
TSA: Pyrus communis mRNA, contig: lc1684.
FX610271.1:1016-1035
AAATGCCGATATCTATTAGTGGCTGTATGT1016GTGTGTATCCAGCTCGCATTATTGTATCAATAAAGCTCCTGCGTTATTGT
TSA: Pyrus communis mRNA, contig: lc8505.
FX617090.1:530-549
GCAAATGTCGATATCTATTAGTGGCTGTAT530GTGTGTATCCAGCTCGCATTATTGTACCAAT
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141924.1:24624266-24624285
AAATGTCGATATCTATTAGTGGCTGTATGT24624266GTGTGTATCCAGCTCGCATTATTGTACCAATAAAGCTCCTGCGTTATTGT
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141941.1:27078235-27078254
AAATGTCGATATCTATTAGTGGCTGTATGT27078235GTGTGTATCCAGCTCGCATTATTGTACCAATAAAGCTCCTGCGTTATTGT
Malus hybrid cultivar cultivar Royalty chromosome 2.
CP141954.1:16670441-16670460
GCAAATGTCGATATCTATTAGTGGCTGTAT16670441GTGTGTATCCAGCTCGCATTATTCTACCAATAAAAGCTCCTGCTTTATAG
Malus hybrid cultivar cultivar Royalty chromosome 15.
CP141967.1:23974021-23974040
AAATGTCGATATCTATTAGTGGCTGTATGT23974021GTGTGTATCCAGCTCGCATTATTGTACCAATAAAGCTCCTGCGTTATTGT
Malus hybrid cultivar cultivar Royalty chromosome 2.
CP141971.1:17417141-17417160
GCAAATGTCGATATCTATTAGTGGCTGTAT17417141GTGTGTATCCAGCTCGCATTATTGTACCAATAAAAGCTCCTGCTTTATAG
Malus hybrid cultivar cultivar Royalty chromosome 15.
CP141984.1:24889750-24889769
AAATGTCGATATCTATTAGTGGCTGTATGT24889750GTGTGTATCCAGCTCGCATTATTGTACCAATAAAGCTCCTGCGTTATTGT
Malus hybrid cultivar cultivar SH6 chromosome 2.
CP143359.1:17760039-17760058
GCAAATGTCGATATCTATTAGTGGCTGTAT17760039GTGTGTATCCAGCTCGCATTATTGTACCAATAAAAGCTCCTGCTTTATAG
Malus x domestica xyloglucan endotransglucosylase/hydrolase 4 mRNA, complete cds.
EU494963.1:1060-1079
GCAAATGTCGATATCTATTAGTGGCTGTAT1060GTGTGTATCCAGCTCGCATTATTGTACCAATAAAAGCTCCTGCTTTATAG
Malus sylvestris genome assembly, chromosome: 2.
OU696504.1:17356240-17356259
GCAAATGTCGATATCTATTAGTGGCTGTAT17356240GTGTGTATCCAGCTCGCATTATTGTACCAATAAAAGCTCCTGCTTTATAG
Malus domestica genome assembly, chromosome: 2.
OU696678.1:17610931-17610950
GCAAATGTCGATATCTATTAGTGGCTGTAT17610931GTGTGTATCCAGCTCGCATTATTGTACCAATAAAAGCTCCTGCTTTATAG
Malus domestica genome assembly, chromosome: 2.
OU744543.1:17651136-17651155
GCAAATGTCGATATCTATTAGTGGCTGTAT17651136GTGTGTATCCAGCTCGCATTATTGTACCAATAAAAGCTCCTGCTTTATAG
Malus domestica genome assembly, chromosome: 2.
OU744954.1:17227826-17227845
GCAAATGTCGATATCTATTAGTGGCTGTAT17227826GTGTGTATCCAGCTCGCATTATTGTACCAATAAAAGCTCCTGCTTTATAG
Malus domestica genome assembly, chromosome: 2.
OU744992.1:17763767-17763786
GCAAATGTCGATATCTATTAGTGGCTGTAT17763767GTGTGTATCCAGCTCGCATTATTGTACCAATAAAAGCTCCTGCTTTATAG
Malus x robusta genome assembly, chromosome: 1.
OY720325.1:24365203-24365222
AAATGTCGATATCTATTAGTGGCTGTATGT24365203GTGTGTATCCAGCTCGCATTATTGTACCAATAAAGCTCCTGCGTTATTGT
Crataegus laevigata genome assembly, chromosome: 1.
OY756938.1:24533887-24533906
AAATGTCGATATCTATTAGTAGCTGTATGT24533887GTGTGTATCCAGCTCGCATTATTGTACCAATAAAGCTCCTGCGTTATTGT
Idaea aversata genome assembly, chromosome: 16.
OU026099.1:796300-796319
AGCATCAGGTAAGTCAGACCTCTGCTATCA796300GTGTGTATCCAGCTCGCATTGAGCATACTTTGTCCATTGTATGCCCTAGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AATGCGAGCTGGATACACAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AATGCGAGCTGGATACACAC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
1.435 | 1.426 | search_plus_done; http://172.18.8.135:50400/match?q=AATGCGAGCTGGATACACAC&k=0&no_gap=0&offset=0&limit=50
2.695 | 1.261 | search_minus_done; http://172.18.8.135:50400/match?q=GTGTGTATCCAGCTCGCATT&k=0&no_gap=0&offset=0&limit=21
2.720 | 0.024 | cgi_end;

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