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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 15:41:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

EG-A11_009_G02 Oil palm abnormal apex Lambda Zap Library Elaeis guineensis cDNA, mRNA sequence.
CN600307.1:57-76
CTTCTTGCTCCTTCTCCTTTGCTGTGCTGC57AATGGCAGTCTCAACCAAGGGCATATTTGGTGAAGATCTTGAACCGAGAT
OPMF01376 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone 5-E01-T3.seq, mRNA sequence.
EL685136.1:63-82
CTTCTTGCTCCTTCTCCTTTGCTGTGCTGC63AATGGCAGTCTCAACCAAGGGCATATTTGGTGAAGATCTTGAACCGAGAT
OPSC00999 Elaeis guineensis Suspension cell cultures Elaeis guineensis cDNA clone 195-E8-T3.seq, mRNA sequence.
EL689225.1:63-82
CTTCTTGCTCCTTCTCCTTTGCTGTGCTGC63AATGGCAGTCTCAACCAAGGGCATATTTGGTGAAGATCTTGAACCGAGAT
pOP-EO02188_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO02188 5', mRNA sequence.
EY409903.1:69-88
CTTCTTGCTCCTTCTCCTTTGCTGTGCTGC69AATGGCAGTCTCAACCAAGGGCATATTTGGTGAAGATCTTGAACCGAGAT
Elaeis guineensis EST, clone (6lib)_isotig39548.
LM635403.1:56-75
CTTCTTGCTCCTTCTCCTTTGCTGTGCTGC56AATGGCAGTCTCAACCAAGGGCATATTTGGTGAAGATCTTGAACCGAGAT
EG-E11_008_E12 embsomSSHE1, Early somatic embryos (SSH) BAP/no BAP Elaeis guineensis cDNA clone EG-E11_008_E12, mRNA sequence.
JK669210.1:356-375
ATCTCGGTTCAAGATCTTCACCAAATATGC356CCTTGGTTGAGACTGCCATTGCAGCACAGCCCCCGCGTACTTTGGGGGCG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AATGGCAGTCTCAACCAAGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AATGGCAGTCTCAACCAAGG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.503 | 0.494 | search_plus_done; http://172.18.8.135:50400/match?q=AATGGCAGTCTCAACCAAGG&k=0&no_gap=0&offset=0&limit=50
0.724 | 0.222 | search_minus_done; http://172.18.8.135:50400/match?q=CCTTGGTTGAGACTGCCATT&k=0&no_gap=0&offset=0&limit=45
0.725 | 0.001 | cgi_end;

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