GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 02:43:45, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Daucus carota subsp. sativus cultivar DH1 chromosome 2.
CP093344.1:47411815-47411835
TAAATCAAATTTCTGATGCTACCTGGCCAT47411815AATGTAGCAAACTGTGGCTGTATAGATTGTAACTGGAATTCCCAAATTTAA
Daucus carota isolate Kuroda chromosome 2.
CP125302.1:45298669-45298689
TAAATCAAATTTCTGATGCTACCTGACCAT45298669AATGTAGCAAACTGTGGCTGTATAAATTATAACTGGAATTCCCAAATTTAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AATGTAGCAAACTGTGGCTGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AATGTAGCAAACTGTGGCTGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.089 | 0.081 | search_plus_done; http://172.18.8.135:50400/match?q=AATGTAGCAAACTGTGGCTGT&k=0&no_gap=0&offset=0&limit=50
0.103 | 0.014 | search_minus_done; http://172.18.8.135:50400/match?q=ACAGCCACAGTTTGCTACATT&k=0&no_gap=0&offset=0&limit=48
0.103 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).