GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 13:03:13, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Arachis hypogaea Ahy.Unigene50257 mRNA sequence.
JR584377.1:192-211
AAACAAACAACAATGGTGATTGTTTATGGT192AATGTATGTGTGTTGGGCCCACGCATGCAGCAATATGTAGTCCTTGATAT
Arachis hypogaea cultivar Shitouqi chromosome B08.
CP031000.1:120081679-120081698
TGGTGATTGGTGAAATTGATTGTTTATGGT120081679AATGTATGTGTGTTGGGCCCACGCATGTAGCAATATGTAGCCCTTGATAT
Arachis hypogaea cultivar Shitouqi chromosome B09.
CP031001.1:126749913-126749932
AAACAAACAACAATGGTGATTGTTTATGGT126749913AATGTATGTGTGTTGGGCCCACGCATGCAGTAATATGTAGTCCTTGATAT
Arachis ipaensis cultivar K30076 chromosome 08.
CP049899.1:117375694-117375713
TGGTGATTGGTGAAATTGATTGTTTATGGT117375694AATGTATGTGTGTTGGGCCCACGCATGTAGCAATATGTAGCCCTTGATAT
Arachis ipaensis cultivar K30076 chromosome 09.
CP049900.1:125980636-125980655
AAACAAACAACAATGGTGATTGTTTATGGT125980636AATGTATGTGTGTTGGGCCCACGCATGCAGTAATATGTAGTCCTTGATAT
VBL6_8_B12_E001.g1 Normalized cDNA library from developing embryos of peanut Arachis hypogaea cDNA, mRNA sequence.
GO342890.1:751-770
ATATCAAGGACTACATATTGCTGCATGCGT751GGGCCCAACACACATACATTACCATAAACAATCAATTTCACCAATCACCA
TSA: Arachis hypogaea CL1Contig4345.Arhy mRNA sequence.
EZ725329.1:725-744
ATATCAAGGACTACATATTGCTGCATGCGT725GGGCCCAACACACATACATTACCATAAACAATCAATTTCACCAATCACCA
Arachis hypogaea cultivar Shitouqi chromosome B03.
CP030995.1:141788607-141788626
TCATGATCATCCAATTATTGCTGCATGCGT141788607GGGCCCAACACACATACATTACCATAAACAATCAATTTCACCAATCACCA
Arachis hypogaea cultivar Shitouqi chromosome B08.
CP031000.1:11524053-11524072
ATATCAAGGACTACATATTGCTGCATGCGT11524053GGGCCCAACACACATACATTACCATAAACAATCAATTTCACCAATCACCA
Arachis ipaensis cultivar K30076 chromosome 08.
CP049899.1:11077316-11077335
ATATCAAGGACTACATATTGCTGCATGCGT11077316GGGCCCAACACACATACATTACCATAAACAATCAATTTCACCAATCACCA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AATGTATGTGTGTTGGGCCC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AATGTATGTGTGTTGGGCCC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.121 | 0.112 | search_plus_done; http://172.18.8.135:50400/match?q=AATGTATGTGTGTTGGGCCC&k=0&no_gap=0&offset=0&limit=50
0.225 | 0.105 | search_minus_done; http://172.18.8.135:50400/match?q=GGGCCCAACACACATACATT&k=0&no_gap=0&offset=0&limit=45
0.228 | 0.003 | cgi_end;

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