GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 08:17:26, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Criorhina berberina genome assembly, chromosome: 1.
OU862870.1:137347801-137347820
AGAACTGAGATCACCTCAGAAAACGGTCAA137347801AATGTTCCACATACGCGACAGTATTTTAGGTTTAACGATCCTCGATGAGA
Criorhina berberina genome assembly, chromosome: 2.
OU862871.1:41725700-41725719
TTTACTGAAAACACCTGAAAAATTGGTAAA41725700AATGTTCCACATACGCGACAGTATTTTATGTTTAGCGATCCCCGATGAGA
Criorhina berberina genome assembly, chromosome: 3.
OU862872.1:44432615-44432634
AGAACTGAGATCACCTCAAAAATCGGTTAA44432615AATGTTCCACATACGCGACAGTATTTTGGGTTCAGCGATCCCCGATGGGA
Daucus carota subsp. sativus cultivar DH1 chromosome 7.
CP093349.1:38994997-38995016
ATCAAGAAATCATACTACAGGCCATGTACG38994997TGTCGCGTATGTGGAACATTAATAATTAAGAGTTGTTGTACCGAAGTATA
Daucus carota isolate Kuroda chromosome 7.
CP125307.1:39057975-39057994
ATCAAGAAATCATACTACAGGCCATGTACG39057975TGTCGCGTATGTGGAACATTAATAATTAAGAGTTGTTGTACCGAAGTATA
Syrphus vitripennis genome assembly, chromosome: 2.
OY288109.1:231938-231957
AATACCCGTATCCGTATTTATATGGGTCAC231938TGTCGCGTATGTGGAACATTTTTCTAAAAATAATAATAATTATTTTCTCG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AATGTTCCACATACGCGACA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AATGTTCCACATACGCGACA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.158 | 0.149 | search_plus_done; http://172.18.8.135:50400/match?q=AATGTTCCACATACGCGACA&k=0&no_gap=0&offset=0&limit=50
0.177 | 0.020 | search_minus_done; http://172.18.8.135:50400/match?q=TGTCGCGTATGTGGAACATT&k=0&no_gap=0&offset=0&limit=47
0.179 | 0.002 | cgi_end;

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