GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 21:03:45, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Dianthus caryophyllus mRNA, clone: CES08D03, 5' end sequence.
FY385198.1:4-23
GCG4AATTCAAATGCGAATAGCGGAGTGACAGGTGGCGGTGGCGGTGGCGGAGG
Dianthus caryophyllus mRNA, clone: CFES01A05, 5' end sequence.
FY394170.1:614-633
GGATTTGAGAAAGGTGAGGGAGATTATTCG614AATTCAAATGCGAATAGCGGAGTGACAGGTGGCGGTGGCGGTGGCGGAGG
Dianthus caryophyllus mRNA, clone: CFES03N01, 5' end sequence.
FY395236.1:614-633
GGATTTGAGAAAGGTGAGGGAGATTATTCG614AATTCAAATGCGAATAGCGGAGTGACAGGTGGCGGTGGCGGTGGCGGAGG
Dianthus caryophyllus mRNA, clone: CFES15_P15, 5' end sequence.
FY399830.1:592-611
GGATTTGAGAAAGGTGAGGGAGATTACTCG592AATTCAAATGCGAATAGCGGAGTGACAGGTGGCGGTGGCGGTGGCGGTGG
Dianthus caryophyllus mRNA, clone: CFES17_M14, 5' end sequence.
FY400513.1:588-607
GGATTTGAGAAAGGTGAGGGAGATTACTCG588AATTCAAATGCGAATAGCGGAGTGACAGGTGGCGGTGGCGGTGGCGGTGG
TSA: Dianthus caryophyllus mRNA, contig: CAK09.640.C1.
FX297842.1:3-22
CG3AATTCAAATGCGAATAGCGGAGTGACAGGTGGCGGTGGCGGTGGCGGAGG
TSA: Dianthus caryophyllus mRNA, contig: CAK09.2140.C1.
FX300736.1:614-633
GGATTTGAGAAAGGTGAGGGAGATTATTCG614AATTCAAATGCGAATAGCGGAGTGACAGGTGGCGGTGGCGGTGGCGGAGG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AATTCAAATGCGAATAGCGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AATTCAAATGCGAATAGCGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.460 | 0.452 | search_plus_done; http://172.18.8.135:50400/match?q=AATTCAAATGCGAATAGCGG&k=0&no_gap=0&offset=0&limit=50
0.490 | 0.030 | search_minus_done; http://172.18.8.135:50400/match?q=CCGCTATTCGCATTTGAATT&k=0&no_gap=0&offset=0&limit=43
0.490 | 0.000 | cgi_end;

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