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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:50:54, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Capsicum annuum CM_MegaContig_40603 mRNA sequence.
JW107679.1:1018-1040
ATGAGGTTATGGATGGCTGAGGGGTTCCTG1018AATTCAGAAAAAGACTTGGAAGGAGAGGCTGAGAAGTGTTTACAAGATCTTGT
Capsicum annuum Takanotsume DNA, chromosome 6, sequence.
AP026701.1:3266070-3266092
ATGAGATCATGGATGGCTGAGGGGTTCCTG3266070AATTCAGAAAAAGACTTGGAAGGAGAGGCTGAGAAGTGTTTGCAAGAGCTTGT
Capsicum annuum Takanotsume DNA, chromosome 6, sequence.
AP026701.1:3822031-3822053
ATGAGATCATGGATGGCTGAGGGGTTCCTG3822031AATTCAGAAAAAGACTTGGAAGGAGAGGCTGAGAAGTGTTTGCAAGAGCTTGT
Capsicum annuum Takanotsume DNA, chromosome 6, sequence.
AP026701.1:4405652-4405674
ATGAGATCATGGATGGCTGAGGGGTTCCTG4405652AATTCAGAAAAAGACTTGGAAGGAGAGGCTGAGAAGTGTTTGCAAGAGCTTGT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 9.
CP124723.1:2720852-2720874
ATGAGGTTATGGATGGCTGAGGGGTTCCTG2720852AATTCAGAAAAAGACTTGGAAGGAGAGGCTGAGAAGTGTTTACAAGATCTTGT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 9.
CP124723.1:2730647-2730669
ATGAGGTTATGGATGGCTGAGGGGTTCCTG2730647AATTCAGAAAAAGACTTGGAAGGAGAGGCTGAGAAGTGTTTGCAAGATCTTGT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 9.
CP124723.1:18100031-18100053
ATGAGGATATGGATGGCTGAGGGATTCCTG18100031AATTCAGAAAAAGACTTGGAAGGAGAGGCTGAGAAGTGTTTACAAGATCTTAT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 6.
CP124726.1:253224755-253224777
ATGAGATCATGGATGGCTGAGGGGTTCCTG253224755AATTCAGAAAAAGACTTGGAAGGAAAGGCTGAGAAGTGTTTGCAAGAGCTTGT
KS23011F08 KS23 Capsicum annuum cDNA, mRNA sequence.
GD112021.1:186-208
ACAAGCTCTTGCAAACACTTCTCAGCCTCT186CCTTCCAAGTCTTTTTCTGAATTCAGGAACCCCTCAGCCATCCATGATCTCAT
Capsicum annuum Takanotsume DNA, chromosome 6, sequence.
AP026701.1:2483713-2483735
ACAAGCTCTTGCAAACACTTCTCAGCCTTT2483713CCTTCCAAGTCTTTTTCTGAATTCAGGAACCCCTCAGCCATCCATGATCTCAT
Capsicum annuum Takanotsume DNA, chromosome 9, sequence.
AP026704.1:248565499-248565521
ATAAGATCTTGTAAACACTTCTCAGCCTCT248565499CCTTCCAAGTCTTTTTCTGAATTCAGGAATCCCTCAGCCATCCATATCCTCAT
Capsicum annuum Takanotsume DNA, chromosome 9, sequence.
AP026704.1:263455155-263455177
ACAAGATCTTGCAAACACTTCTCAGCCTCT263455155CCTTCCAAGTCTTTTTCTGAATTCAGGAACCCCTCAGCCATCCATAACCTCAT
Capsicum annuum Takanotsume DNA, chromosome 9, sequence.
AP026704.1:263464950-263464972
ACAAGATCTTGTAAACACTTCTCAGCCTCT263464950CCTTCCAAGTCTTTTTCTGAATTCAGGAACCCCTCAGCCATCCATAACCTCAT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 6.
CP124726.1:250717596-250717618
ACAAGCTCTTGCAAACACTTCTCAGCCTCT250717596CCTTCCAAGTCTTTTTCTGAATTCAGGAACCCCTCAGCCATCCATGATCTCAT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 6.
CP124726.1:251284883-251284905
ACAAGCTCTTGCAAACACTTCTCAGCCTCT251284883CCTTCCAAGTCTTTTTCTGAATTCAGGAACCCCTCAGCCATCCATGATCTCAT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 6.
CP124726.1:251891111-251891133
ACAAGCTCTTGCAAACACTTCTCAGCCTCT251891111CCTTCCAAGTCTTTTTCTGAATTCAGGAACCCCTCAGCCATCCATGATCTCAT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 6.
CP124726.1:252442413-252442435
ACAAGCTCTTGCAAACACTTCTCAGCCTCT252442413CCTTCCAAGTCTTTTTCTGAATTCAGGAACCCCTCAGCCATCCATGATCTCAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AATTCAGAAAAAGACTTGGAAGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AATTCAGAAAAAGACTTGGAAGG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.199 | 0.190 | search_plus_done; http://172.18.8.135:50400/match?q=AATTCAGAAAAAGACTTGGAAGG&k=0&no_gap=0&offset=0&limit=50
0.392 | 0.193 | search_minus_done; http://172.18.8.135:50400/match?q=CCTTCCAAGTCTTTTTCTGAATT&k=0&no_gap=0&offset=0&limit=42
0.398 | 0.006 | cgi_end;

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