GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 18:10:42, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Capsicum annuum Takanotsume DNA, chromosome 5, sequence.
AP026700.1:244168513-244168538
ACCATGTATTTTTGAGTGATAGTCACCTAA244168513AATTCAGGGATATTTTTAACCTTTTTTCGTATCTATATCATTTCATCTAAGATCAT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 5.
CP124727.1:244439419-244439444
ACCATGTATTTTTGAGTGACAGTCACCTAA244439419AATTCAGGGATATTTTTAACCTTTTTTCGTATCTATATCATTTCATCTAAGATCAT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 4.
CP124728.1:218584613-218584638
TAAGAATAATATTTTTGATCTATTTCAAAT218584613AATTCAGGGATATTTTTAACCTTTTTTCATATTATCTATGAAGTTACACACTCAAT
KS21026F07 KS21 Capsicum annuum cDNA, mRNA sequence.
GD101570.1:578-603
ATTGAGTGTGTAACTTCATAGATAATATGA578AAAAAGGTTAAAAATATCCCTGAATTA
Capsicum annuum Takanotsume DNA, chromosome 4, sequence.
AP026699.1:34933427-34933452
ATTGAGTGTGTAACTTCATAGATAATATGA34933427AAAAAGGTTAAAAATATCCCTGAATTATTTGAAATAGATCAAAAATATTCTTCTTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AATTCAGGGATATTTTTAACCTTTTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AATTCAGGGATATTTTTAACCTTTTT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.109 | 0.101 | search_plus_done; http://172.18.8.135:50400/match?q=AATTCAGGGATATTTTTAACCTTTTT&k=0&no_gap=0&offset=0&limit=50
0.222 | 0.113 | search_minus_done; http://172.18.8.135:50400/match?q=AAAAAGGTTAAAAATATCCCTGAATT&k=0&no_gap=0&offset=0&limit=47
0.223 | 0.001 | cgi_end;

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