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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-12 16:56:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

BJ03010H01 BJ03 Capsicum annuum cDNA 5', mRNA sequence.
CO910774.1:444-464
CTTACTATAACAGTTCCAGATGTAGGCAAT444AATTGGTTCTGGATCACTGCCTTAAGTCCGTTAGCGGGTGTATATTATTGG
KL4B.103A06F.051103T7 KL4B Nicotiana tabacum cDNA clone KL4B.103A06, mRNA sequence.
DV999435.1:670-690
CTCACTATAACAGTTCCTGATGTAGGCAAT670AATTGGTTCTGGATCACTGCCTTAAGTCCGTTAGCGGGCATATATTATTGG
KG9B.101C04F.060120T7 KG9B Nicotiana tabacum cDNA clone KG9B.101C04, mRNA sequence.
EB677214.1:655-675
CTCACTATAACAGTTCCTGATGTAGGCAAT655AATTGGTTCTGGATCACTGCCTTAAGTCCGTTAGCGGGCATATATTATTGG
KG9B.103O05F.051128T7 KG9B Nicotiana tabacum cDNA clone KG9B.103O05, mRNA sequence.
EB678211.1:610-630
CTCACTATAACAGTTCCTGATGTAGGCAAT610AATTGGTTCTGGATCACTGCCTTAAGTCCGTTAGCGGGCATATATTATTGG
Nicotiana tabacum cDNA, clone: TBK02GR0099_2_A03, 5'-end sequence.
FS436598.1:606-626
CTCACTATAACAGTTCCTGATGTAGGCNAT606AATTGGTTCTGGATCACTGCCTTAAGTCCGTTAGCGGGCA
KS19005G10 KS19 Capsicum annuum cDNA, mRNA sequence.
GD087875.1:479-499
CTTACTATAACAGTTCCAGATGTAGGCAAT479AATTGGTTCTGGATCACTGCCTTAAGTCCGTTAGCGGGTGTATATTATTGG
KS26010A09 KS26 Capsicum annuum cDNA, mRNA sequence.
GD130661.1:51-71
CTTACTATAACAGTTCCAGATGTAGGCAAT51AATTGGTTCTGGATCACTGCCTTAAGTCCGTTAGCGGGTGTATATTATTGG
NTOM5284 Nicotiana tomentosiformis normalized full-length cDNA Library Nicotiana tomentosiformis cDNA 5', mRNA sequence.
JZ959743.1:133-153
CTCACTATAACAGTTCCTGATGTAGGCAAT133AATTGGTTCTGGATCACTGCCTTAAGTCCGTTAGCGGGCATATATTATTGG
NTOM7452 Nicotiana tomentosiformis normalized full-length cDNA Library Nicotiana tomentosiformis cDNA 5', mRNA sequence.
JZ965895.1:270-290
CTCACTATAACAGTTCCTGATGTAGGCAAT270AATTGGTTCTGGATCACTGCCTTAAGTCCGTTAGCGGGCATATATTATTGG
TSA: Petunia axillaris PETAX023419:Contig1 mRNA sequence.
JI343999.1:26-46
CATAACGTTCCCAGATGTTGGCAAT26AATTGGTTCTGGATCACTGCCTTAAGTCCGTTAGCGGGTGCATATTACTGG
TSA: Petunia axillaris PETAX023419:Contig2 mRNA sequence.
JI344000.1:147-167
CTTACTATAACGTTCCCAGATGTTGGCAAT147AATTGGTTCTGGATCACTGCCTTAAGTCCGTTAGCGGGTGCATATTACTGG
TSA: Petunia integrifolia subsp. inflata PETIN007113:Contig1 mRNA sequence.
JI364198.1:277-297
CTTACTATAACATTTCCAGATGTTGGTAAT277AATTGGTTCTGGATCACTGCCTTAAGTCCGTTAGCGGGTGCATATTACTGG
TSA: Petunia integrifolia subsp. inflata PETIN007113:Contig2 mRNA sequence.
JI364199.1:141-161
CTTACTATAACATTTCCAGATGTTGGTAAT141AATTGGTTCTGGATCACTGCCTTAAGTCCGTTAGCGGGTGCATATTACTGG
TSA: Petunia integrifolia subsp. inflata PETIN007113:Contig3 mRNA sequence.
JI364200.1:142-162
CTTACTATAACATTTCCAGATGTTGGTAAT142AATTGGTTCTGGATCACTGCCTTAAGTCCGTTAGCGGGTGCATATTACTGG
Capsicum annuum Takanotsume DNA, chromosome 2, sequence.
AP026697.1:3280513-3280533
CTTACTATAACAGTTCCAGATGTAGGCAAT3280513AATTGGTTCTGGATCACTGCCTTAAGTCCGTTAGCGTAAGTATTGCTAATA
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 3.
CP124717.1:1506034-1506054
CTTACTATAACAGTTCCAGATGTAGGCAAT1506034AATTGGTTCTGGATCACTGCCTTAAGTCCGTTAGCGTAAGTATTGCTAATC
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 2.
CP124730.1:3406538-3406558
CTTACTATAACAGTTCCAGATGTAGGCAAT3406538AATTGGTTCTGGATCACTGCCTTAAGTCCGTTAGCGTAAGTATTGCTAATA
Geum urbanum genome assembly, chromosome: 12.
OX327008.1:55736162-55736182
CTTACAATAACTGTTTCAGATTTCGGCAAC55736162AATTGGTTCTGGATCACTGCCTTGAGTCCACTAGCGTAAGTCCATACTTCA
KS26059H04 KS26 Capsicum annuum cDNA, mRNA sequence.
GD135105.1:282-302
CCAATAATATACACCCGCTAACGGACTTAA282GGCAGTGATCCAGAACCAATTATTGCCTACATCTGGAACTGTTATAGTAAG
TSA: Capsicum annuum MGMT_Contig35233 mRNA sequence.
JW085477.1:424-444
CCAATAATATACACCCGCTAACGGACTTAA424GGCAGTGATCCAGAACCAATTATTGCCTACATCTGGAACTGTTATAGTAAG
CHO_OF4995xg17f1.ab1 CHO_OF4 Nicotiana tabacum genomic 5', genomic survey sequence.
FH437087.1:136-156
TATTAGCAGTACTTACGCTAACGGACTTAA136GGCAGTGATCCAGAACCAATTATTGCCTACATCAGGAACTGTTATAGTGAG
CHO_OF5094xj11r1.ab1 CHO_OF5 Nicotiana tabacum genomic 3', genomic survey sequence.
FH689214.1:302-322
TATTAGCAGTACTTACGCTAACGGACTTAA302GGCAGTGATCCAGAACCAATTATTGCCTACATCAGGAACTGTTATAGTGAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AATTGGTTCTGGATCACTGCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AATTGGTTCTGGATCACTGCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.038 | 1.029 | search_plus_done; http://172.18.8.135:50400/match?q=AATTGGTTCTGGATCACTGCC&k=0&no_gap=0&offset=0&limit=50
1.313 | 0.275 | search_minus_done; http://172.18.8.135:50400/match?q=GGCAGTGATCCAGAACCAATT&k=0&no_gap=0&offset=0&limit=32
1.316 | 0.003 | cgi_end;

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