GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 08:39:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Dianthus caryophyllus mRNA, clone: CES11_K21, 5' end sequence.
FY386517.1:215-234
TGCTACCTAATCGCCGCCATCAACTACAAA215GGCTTCACCGTCAAACAATTCCAAGAACTCCGCCGTACACTTCCACCCTC
Dianthus caryophyllus mRNA, clone: CES31K01, 5' end sequence.
FY394025.1:229-248
TGCTACCTAATCGCCGCCATCAACTACAAA229GGCTTCACCGTCAAACAATTCCAAGAACTCCGCCGTACACTTCCACCCTC
TransId-235176 CAET42MIX Coffea arabica cDNA clone CAET42MIX-CFEX405TV similar to 50S ribosomal protein L10, chloroplast precursor - Nicotiana tabacum (Common tobacco), mRNA sequence.
GT007440.1:307-326
TGCTATCTCATCGCTGGCATTGGCTATAAA307GGCTTCACCGTCAAACAATTTCAAGAACTTAGAAGGCAACTCCCAGAATC
CA00-XX-CB1-084-C04-RF.F Coffea arabica CB1 Coffea arabica cDNA clone CA00-XX-CB1-084-C04-RF, mRNA sequence.
GW428755.1:298-317
TGCTATCTCATCGCTGGCATTGGCTATAAA298GGCTTCACCGTCAAACAATTTCAAGAACTTAGAAGGCAACTCCCAGAATC
Lupinus angustifolius cultivar Tanjil voucher WA chromosome LG-12.
CP023124.1:22012197-22012216
TGTTACCTCCTCGCCGCAATCAACTACAAA22012197GGCTTCACCGTCAAACAATTCCAGGATCTTCGCAAAACCCTCCCCGAAAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AATTGTTTGACGGTGAAGCC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AATTGTTTGACGGTGAAGCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.091 | 0.082 | search_plus_done; http://172.18.8.135:50400/match?q=AATTGTTTGACGGTGAAGCC&k=0&no_gap=0&offset=0&limit=50
0.684 | 0.593 | search_minus_done; http://172.18.8.135:50400/match?q=GGCTTCACCGTCAAACAATT&k=0&no_gap=0&offset=0&limit=50
0.687 | 0.004 | cgi_end;

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