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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 08:15:23, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

NXPV_083_G12_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda cDNA clone NXPV_083_G12 5' similar to Arabidopsis thaliana sequence At3g04350 unknown protein see http://mips.gsf.de/proj/thal/db/ind
BG832942.1:94-113
GATTGGGAACACTTCACTCTTACAGTGAGC94AATTTCACTGGTGAACTATGGCAAGTTTATTTCTCACGGCACAGCGGTGG
RTNACL1_37_C09.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone RTNACL1_37_C09_A029 3', mRNA sequence.
CV033867.1:138-157
GATTGGGAACATTTCACTCTTAGAGTGAGC138AATTTCACTGGTGAACTATGGAAAGTTTATTTCTCACGGCACAGCGGTGG
PCO0117.CR_O04 Pco01-Bark-Wounded-Norm (PCO01) Pinus contorta cDNA clone PCO0117_O04 3', mRNA sequence.
GT250833.1:166-185
GATTGGGAACATTTCACTCTTAGAGTGAGC166AATTTCACTGGTGAACTATGGAAAGTTTATTTCTCACAGCACAGCGGTGG
PCO0117.C21_O04 Pco01-Bark-Wounded-Norm (PCO01) Pinus contorta cDNA clone PCO0117_O04 5', mRNA sequence.
GT254357.1:166-185
GATTGGGAACATTTCACTCTTAGAGTGAGC166AATTTCACTGGTGAACTATGGAAAGTTTATTTCTCACAGCACAGCGGTGG
Pinus taeda isolate 2314 anonymous locus 2_8324_01 genomic sequence.
FJ103297.2:121-140
GATTGGGAACATTTCACTCTTAGAGTGAGC121AATTTCACTGGTGAACTATGGAAAGTTTATTTCTCACGGCACAGCGGTGG
Pinus taeda isolate 2325 anonymous locus 2_8324_01 genomic sequence.
FJ103298.2:121-140
GATTGGGAACATTTCACTCTTAGAGTGAGC121AATTTCACTGGTGAACTATGGAAAGTTTATTTCTCACGGCACAGCGGTGG
Pinus taeda isolate 2312 anonymous locus 2_8324_01 genomic sequence.
FJ103299.2:121-140
GATTGGGAACATTTCACTCTTAGAGTGAGC121AATTTCACTGGTGAACTATGGAAAGTTTATTTCTCACGGCACAGCGGTGG
Pinus taeda isolate 2323 anonymous locus 2_8324_01 genomic sequence.
FJ103300.2:121-140
GATTGGGAACATTTCACTCTTAGAGTGAGC121AATTTCACTGGTGAACTATGGAAAGTTTATTTCTCACGGCACAGCGGTGG
Pinus taeda isolate 2316 anonymous locus 2_8324_01 genomic sequence.
FJ103301.2:121-140
GATTGGGAACATTTCACTCTTAGAGTGAGC121AATTTCACTGGTGAACTATGGAAAGTTTATTTCTCACGGCACAGCGGTGG
Pinus taeda isolate 2322 anonymous locus 2_8324_01 genomic sequence.
FJ103302.2:121-140
GATTGGGAACATTTCACTCTTAGAGTGAGC121AATTTCACTGGTGAACTATGGAAAGTTTATTTCTCACGGCACAGCGGTGG
Pinus taeda isolate 2310 anonymous locus 2_8324_01 genomic sequence.
FJ103303.2:121-140
GATTGGGAACATTTCACTCTTAGAGTGAGC121AATTTCACTGGTGAACTATGGAAAGTTTATTTCTCACGGCACAGCGGTGG
Pinus taeda isolate 2324 anonymous locus 2_8324_01 genomic sequence.
FJ103304.2:121-140
GATTGGGAACATTTCACTCTTAGAGTGAGC121AATTTCACTGGTGAACTATGGAAAGTTTATTTCTCACAGCACAGCGGTGG
Pinus taeda isolate 2326 anonymous locus 2_8324_01 genomic sequence.
FJ103305.2:121-140
GATTGGGAACATTTCACTCTTAGAGTGAGC121AATTTCACTGGTGAACTATGGAAAGTTTATTTCTCACGGCACAGCGGTGG
Pinus taeda isolate 2318 anonymous locus 2_8324_01 genomic sequence.
FJ103306.2:121-140
GATTGGGAACATTTCACTCTTAGAGTGAGC121AATTTCACTGGTGAACTATGGAAAGTTTATTTCTCACGGCACAGCGGTGG
Pinus taeda isolate 2319 anonymous locus 2_8324_01 genomic sequence.
FJ103307.2:121-140
GATTGGGAACATTTCACTCTTAGAGTGAGC121AATTTCACTGGTGAACTATGGAAAGTTTATTTCTCACGGCACAGCGGTGG
Pinus taeda isolate 2315 anonymous locus 2_8324_01 genomic sequence.
FJ103308.2:121-140
GATTGGGAACATTTCACTCTTAGAGTGAGC121AATTTCACTGGTGAACTATGGAAAGTTTATTTCTCACGGCACAGCGGTGG
Pinus taeda isolate 2321 anonymous locus 2_8324_01 genomic sequence.
FJ103309.2:121-140
GATTGGGAACATTTCACTCTTAGAGTGAGC121AATTTCACTGGTGAACTATGGAAAGTTTATTTCTCACAGCACAGCGGTGG
Pinus taeda isolate 2309 anonymous locus 2_8324_01 genomic sequence.
FJ103310.2:121-140
GATTGGGAACATTTCACTCTTAGAGTGAGC121AATTTCACTGGTGAACTATGGAAAGTTTATTTCTCACGGCACAGCGGTGG
Pinus taeda isolate 2317 anonymous locus 2_8324_01 genomic sequence.
FJ103311.2:121-140
GATTGGGAACATTTCACTCTTAGAGTGAGC121AATTTCACTGGTGAACTATGGAAAGTTTATTTCTCACGGCACAGCGGTGG
Pinus taeda isolate 2311 anonymous locus 2_8324_01 genomic sequence.
FJ103312.2:121-140
GATTGGGAACATTTCACTCTTAGAGTGAGC121AATTTCACTGGTGAACTATGGAAAGTTTATTTCTCACAGCACAGCGGTGG
Pinus taeda isolate 2320 anonymous locus 2_8324_01 genomic sequence.
FJ103313.2:121-140
GATTGGGAACATTTCACTCTTAGAGTGAGC121AATTTCACTGGTGAACTATGGAAAGTTTATTTCTCACGGCACAGCGGTGG
Pinus taeda isolate 2313 anonymous locus 2_8324_01 genomic sequence.
FJ103314.2:121-140
GATTGGGAACATTTCACTCTTAGAGTGAGC121AATTTCACTGGTGAACTATGGAAAGTTTATTTCTCACGGCACAGCGGTGG
Pinus lambertiana isolate 2328 hypothetical protein (2_8324_01) gene, partial cds.
JQ262883.1:121-140
GATTGGGAACATTTCACTCTTAGAGTGAGC121AATTTCACTGGTGAACTATGGAAAGTTTATTTCTCACAGCACAGCGGTGG
Pieris napi genome assembly, chromosome: 4.
FR997698.1:4795888-4795907
AGTTTGTGGACAGATTCAAGATGGAGGTGT4795888AATTTCACTGGTGAACTATGTTCTGTGGAATAATTATCGACGTTACCAAC
Pieris napi genome assembly, chromosome: 4.
HG993169.1:4764420-4764439
AGTTTGTGGACAGATTCAAGATGGAGGTGT4764420AATTTCACTGGTGAACTATGTTCTGTGGAATAATTATCGACGTTACCAAC
Pieris brassicae genome assembly, chromosome: 5.
LR989936.1:4372878-4372897
AGTTTGTGGACGGATTCAAGATGGAGGTGT4372878AATTTCACTGGTGAACTATGTTCTATGGAATAATTATCGACGTTACCAAC
Cheilosia urbana genome assembly, chromosome: 2.
OX297854.1:123034918-123034937
ATCTGAGAAGAATTTAGCTCCGTCCTTCAC123034918AATTTCACTGGTGAACTATGTTCACCATCAATCTAAACTCCTTATAGGTT
Heligmosomoides polygyrus polygyrus genome assembly, chromosome: I.
OX377205.1:7425687-7425706
GCTGATGAAATCTAGTTCAACTATCCGTGA7425687AATTTCACTGGTGAACTATGGGTTTCAACGGTCTGAAACAATTCATGGCG
Thereva unica genome assembly, chromosome: 4.
OX465284.1:5526336-5526355
AGAATCCTCTTTTGCCTCTATAAACCTCTC5526336AATTTCACTGGTGAACTATGCATGGCTATGGCATGGCGTACATAAATCAT
PBA0125.CR_D07 Pba01-Bark-wounded-Norm (PBA01) Pinus banksiana cDNA clone PBA0125_D07 3', mRNA sequence.
GW755379.1:680-699
CCACCGCTGTGCTGTGAGAAATAAACTTTC680CATAGTTCACCAGTGAAATTGCTCACTCTAAGAGTGAAATGTTCCCAATC
Daphnia pulex isolate KAP106 chromosome 10.
CP087236.1:15703146-15703165
TCCTTTTCGAAATGTTTCAATTCCTTCCTG15703146CATAGTTCACCAGTGAAATTTTTATTTTTTAAACCCAGAAAATTAATATG
Daphnia pulex isolate KAP4 chromosome 10.
CP087248.1:15653890-15653909
TCCTTTTCGAAATGTTTCAATTCCTTCCTG15653890CATAGTTCACCAGTGAAATTTTTAATTTTTTAAACCCAGAAAATTAATAT
Daphnia pulex isolate STM2 chromosome 10.
CP087260.1:14327766-14327785
TCCTTTTTTAAATGTTTCAATTCCTTCCTG14327766CATAGTTCACCAGTGAAATTTTTATTTTTTAAACCCAGAAAATTAATATG
Emmelina monodactyla genome assembly, chromosome: 16.
OU745316.1:8809789-8809808
GGCATTGCTTTTCTGTTGTTCACCTGTGTG8809789CATAGTTCACCAGTGAAATTTGTAAATGTACCTATATGATAAGTTCAGCT
Cheilosia vernalis genome assembly, chromosome: 5.
OX421362.1:35624463-35624482
GAGTTACCAACGTCTAAATTGATGGTGCAG35624463CATAGTTCACCAGTGAAATTGTGTAGGGCTGAGCTGAATTCTTCTCAGAT
Cheilosia grossa genome assembly, chromosome: 4.
OY720147.1:34220871-34220890
ACCTCTAAAGAGTTTAGATTGATGGTGCAG34220871CATAGTTCACCAGTGAAATTGTGTAGGACTGAGCTAAATTCGTCTCAGAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AATTTCACTGGTGAACTATG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AATTTCACTGGTGAACTATG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.482 | 0.473 | search_plus_done; http://172.18.8.135:50400/match?q=AATTTCACTGGTGAACTATG&k=0&no_gap=0&offset=0&limit=50
0.722 | 0.240 | search_minus_done; http://172.18.8.135:50400/match?q=CATAGTTCACCAGTGAAATT&k=0&no_gap=0&offset=0&limit=21
0.727 | 0.005 | cgi_end;

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