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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 15:19:11, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Thalassophryne amazonica genome assembly, chromosome: 4.
LR722969.1:26956439-26956458
TGACAGGAGACCACAAGATGACACAATGAA26956439ACAAACACTTATTTCCACTGTGGTCCATGTGAGGCTAAAACTTGACAATA
Thalassophryne amazonica genome assembly, chromosome: 4.
LR722969.1:26979080-26979099
TGACAGGAGACCACAAGATGACACAATGAA26979080ACAAACACTTATTTCCACTGTGGTCCATGTGAGGCTAAAACTTGACAATA
Thalassophryne amazonica genome assembly, chromosome: 5.
LR722970.1:15017754-15017773
GGTGAAAATATCAACAGATGACACAATAAA15017754ACAAACACTTATTTCCACTGTGGTCCATGTGAGGCTAAAACGTCACACTG
Schistosoma spindale genome assembly, chromosome: Z.
OX336416.1:17439078-17439097
ACACTAACACCTCAGACAGAGTGAGGACAT17439078ACAAACACTTATTTCCACTGTTCCATTCAAGCAGTGGGGTTAGGTAGAAT
Thalassophryne amazonica genome assembly, chromosome: 1.
LR722966.1:168077887-168077906
TGTTGTCAGGTTTTCGCCTCACATGGACCA168077887CAGTGGAAATAAGTGTTTGTTTTATTGTCTCATCTGTGTATCACTGATAT
Thalassophryne amazonica genome assembly, chromosome: 2.
LR722967.1:21199736-21199755
TGTTGTCACGTTTTAGCCTCACATAGACCA21199736CAGTGGAAATAAGTGTTTGTTTTATTGTGTCATCCGTGTATCGTTGATAT
Thalassophryne amazonica genome assembly, chromosome: 3.
LR722968.1:113707944-113707963
TGTTGTCAAGTTTTAGCCTCACATGGACCA113707944CAGTGGAAATAAGTGTTTGTTTTATTGTGTCATCCTTGTATCATTGATAT
Thalassophryne amazonica genome assembly, chromosome: 6.
LR722971.1:8146620-8146639
TGTTGTCAAGTTTCAGCTTCACATGGACCA8146620CAGTGGAAATAAGTGTTTGTTTTATTGTGTCATCTGTGTATCATTGATAT
Squalius cephalus genome assembly, chromosome: 17.
OX439263.1:3053390-3053409
CACCCGAGTCTTTACTCTAGAACTGGGGAA3053390CAGTGGAAATAAGTGTTTGTTTTTGTTGTTTTTTTTTTGTGTGTGTTTTT
Colias croceus genome assembly, chromosome: 12.
HG991970.1:9529491-9529510
AACGTTATACCAGTGCAAAGATAAATTATT9529491CAGTGGAAATAAGTGTTTGTTAATAAAAAAGAAACTTACGAAAGTCACAA
Colias croceus genome assembly, chromosome: 27.
HG991985.1:4735550-4735569
AACGTTATACCAGTGCAAAGATAAATTATT4735550CAGTGGAAATAAGTGTTTGTTAATAAAAAAGAAACTTACGAAAGTCACAA
Thyatira batis genome assembly, chromosome: 14.
LR990499.1:8975525-8975544
CATCGTGTAGCGACTGTGCTGAGCTCTGTG8975525CAGTGGAAATAAGTGTTTGTGCAAGATCATTACCTATGGTGGAGAAGTAT
Polydrusus cervinus genome assembly, chromosome: 8.
OW284517.1:42835726-42835745
TTTTTTAGCTGAATATCGAAAAAAAATGTC42835726CAGTGGAAATAAGTGTTTGTCAAAAAAACAGAGAGGTAACAAACTTACCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACAAACACTTATTTCCACTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACAAACACTTATTTCCACTG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.164 | 0.156 | search_plus_done; http://172.18.8.135:50400/match?q=ACAAACACTTATTTCCACTG&k=0&no_gap=0&offset=0&limit=50
0.267 | 0.103 | search_minus_done; http://172.18.8.135:50400/match?q=CAGTGGAAATAAGTGTTTGT&k=0&no_gap=0&offset=0&limit=46
0.273 | 0.006 | cgi_end;

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