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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 12:53:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Euphorbia lathyris genome assembly, chromosome: 1.
OY755220.1:99440415-99440434
TCAACCCTACATATAAAAGGACAAACCCTC99440415ACAACAAGTACAAGCAGAATTGAATAAAATTATTTGCTTTTTCAAGCCAA
Acleris sparsana genome assembly, chromosome: 5.
OV281290.1:5429488-5429507
TAACGAACTTCTACATGGTGAATAAAACCT5429488ACAACAAGTACAAGCAGAATTATAAAATTCCAATAATTATTTTACGACGT
Elysia crispata genome assembly, chromosome: 9.
OY973774.1:10641440-10641459
ACTACAACTACAAGAAGTACAACTACAATT10641440ACAACAAGTACAAGCAGAATTATTACAAGTGCAAGTACAACTACAGCTAC
Alisma plantago-aquatica genome assembly, chromosome: 3.
OY856411.1:516948236-516948255
CTTATATCTTTTCTTCTTGTTATTTGTGGT516948236ATTCTGCTTGTACTTGTTGTCTTGGAGGGGGAACATGATGGGTAAGTTGG
Boloria selene genome assembly, chromosome: 1.
HG993132.1:1298495-1298514
GAAGTTTGGGAAAATGATTTATTAGATGTC1298495ATTCTGCTTGTACTTGTTGTTTTTCGATAAAATTTTTCAATATGTAACAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACAACAAGTACAAGCAGAAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACAACAAGTACAAGCAGAAT | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.173 | 0.165 | search_plus_done; http://172.18.8.135:50400/match?q=ACAACAAGTACAAGCAGAAT&k=0&no_gap=0&offset=0&limit=50
0.279 | 0.106 | search_minus_done; http://172.18.8.135:50400/match?q=ATTCTGCTTGTACTTGTTGT&k=0&no_gap=0&offset=0&limit=47
0.281 | 0.002 | cgi_end;

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