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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-04 12:59:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Mado-00-K1-G1-004B_F09 K1-G1 Malus domestica cDNA similar to nodulation receptor kinase, mRNA sequence.
JZ481630.1:109-128
TCCTTTTCATCCTTCATTTTACCGTAGTAA109ACAACTCCAAAACCTCCCGAACCTGTTTTCTTCTCAAGCTTTCTGGTAGC
Medicago truncatula clone mth2-15f4, WORKING DRAFT SEQUENCE, 13 unordered pieces.
AC229724.18:169088-169107
ATGGTTCCGTCACTTAAACTTCCTTTATAA169088ACAACTCCAAAACCTCCCGATCCCAACCGGTAGGAATAGTTATCGGTTGC
Medicago truncatula clone mth1-63a17, complete sequence.
AC130275.16:24215-24234
ATGGTTCCGTCACTTAAACTTCCTTTATAA24215ACAACTCCAAAACCTCCCGATCCCAACCGGTAGGAATAGTTATCGGTTGC
Jasminum sambac cultivar Hutoumoli linkage group Lg9.
CP073652.1:2614809-2614828
TCCTTCCCCTGTTTCAATTTACCATAGTAC2614809ACAACTCCAAAACCTCCCGAGCCAACTTTTCTCTCAAAGTTATTTGTGGC
Malus hybrid cultivar cultivar Royalty chromosome 12.
CP141964.1:19378809-19378828
TCCTTTTCATCCTTCATTTTACCGTAGTAA19378809ACAACTCCAAAACCTCCCGAACCTATTTTCTTCTCAAACTTTCTGGTAGC
Malus hybrid cultivar cultivar Royalty chromosome 12.
CP141981.1:19499066-19499085
TCCTTTTCATCCTTCATTTTACCGTAGTAA19499066ACAACTCCAAAACCTCCCGAACCTATTTTCTTCTCAAACTTTCTGGTAGC
Malus hybrid cultivar cultivar Royalty chromosome 12.
CP141981.1:19514534-19514553
TCCTTTTCATCCTTCATTTTACCGTAGTAA19514534ACAACTCCAAAACCTCCCGAACCTATTTTCTTCTCAAACTTTCTGGTAGC
Malus hybrid cultivar cultivar Royalty chromosome 12.
CP141981.1:19529948-19529967
TCCTTTTCATCCTTCATTATACCGTAGTAA19529948ACAACTCCAAAACCTCCCGAACCTATTTTCTTCTCAAACTTTCTGGTAGC
Malus hybrid cultivar cultivar SH6 chromosome 12.
CP143369.1:19375949-19375968
TCCTTTTCATCCTTCATTTTACCGTAGTAA19375949ACAACTCCAAAACCTCCCGAACCTATTTTCTTCTCAAACTTTCTGGTAGC
Malus hybrid cultivar cultivar SH6 chromosome 12.
CP143369.1:19384665-19384684
TCCTTTTCATCCTTCATTTTACCGTAGTAA19384665ACAACTCCAAAACCTCCCGAACCTATTTTCTTCTCAAACTTTCTGGTAGC
Malus hybrid cultivar cultivar SH6 chromosome 12.
CP143386.1:17806322-17806341
TCCTTTTCATCCTTCATTTTACCGTAGTAA17806322ACAACTCCAAAACCTCCCGAACCTATTTTCTTCTCAAACTTTCTGGTAGC
Malus hybrid cultivar cultivar SH6 chromosome 12.
CP143386.1:17815325-17815344
TCCTTTTCATCCTTCATTTTACCGTAGTAA17815325ACAACTCCAAAACCTCCCGAACCTATTTTCTTCTCAAACTTTCTGGTAGC
Malus sylvestris genome assembly, chromosome: 12.
OU696514.1:19006709-19006728
TCCTTTTCATCCTTCATTTTACCGTAGTAA19006709ACAACTCCAAAACCTCCCGAACCTATTTTCTTCTCAAACTTTCTGGTAGC
Malus sylvestris genome assembly, chromosome: 12.
OU696514.1:19019941-19019960
TCCTTTTCATCCTTCATTTTACCGTAGTAA19019941ACAACTCCAAAACCTCCCGAACCTATTTTCTTCTCAAACTTTCTGGTAGC
Malus sylvestris genome assembly, chromosome: 12.
OU696514.1:19028695-19028714
TCCTTTTCATCCTTCATTTTACCGTAGTAA19028695ACAACTCCAAAACCTCCCGAACCTATTTTCTTCTCAAACTTTCTGGTAGC
Malus domestica genome assembly, chromosome: 12.
OU696688.1:19098212-19098231
TCCTTTTCATCCTTCATTTTACCGTAGTAA19098212ACAACTCCAAAACCTCCCGAACCTATTTTCTTCTCAAACTTTCTGGTAGC
Malus domestica genome assembly, chromosome: 12.
OU696688.1:19111660-19111679
TCCTTTTCATCCTTCATTTTACCGTAGTAA19111660ACAACTCCAAAACCTCCCGAACCTATTTTCTTCTCAAACTTTCTGGTAGC
Malus domestica genome assembly, chromosome: 12.
OU696688.1:19120403-19120422
TCCTTTTCATCCTTCATTTTACCGTAGTAA19120403ACAACTCCAAAACCTCCCGAACCTATTTTCTTCTCAAACTTTCTGGTAGC
Malus domestica genome assembly, chromosome: 12.
OU744553.1:19172016-19172035
TCCTTTTCATCCTTCATTTTACCGTAGTAA19172016ACAACTCCAAAACCTCCCGAACCTATTTTCTTCTCAAACTTTCTGGTAGC
Malus domestica genome assembly, chromosome: 12.
OU744553.1:19184889-19184908
TCCTTTTCATCCTTCATTTTACCGTAGTAA19184889ACAACTCCAAAACCTCCCGAACCTATTTTCTTCTCAAACTTTCTGGTAGC
Malus domestica genome assembly, chromosome: 12.
OU744553.1:19193618-19193637
TCCTTTTCATCCTTCATTATACCGTAGTAA19193618ACAACTCCAAAACCTCCCGAACCTATTTTCTTCTCAAACTTTCTGGTAGC
Malus domestica genome assembly, chromosome: 12.
OU744964.1:18725479-18725498
TCCTTTTCATCCTTCATTTTACCGTAGTAA18725479ACAACTCCAAAACCTCCCGAACCTATTTTCTTCTCAAACTTTCTGGTAGC
Malus domestica genome assembly, chromosome: 12.
OU744964.1:18738202-18738221
TCCTTTTCATCCTTCATTTTACCGTAGTAA18738202ACAACTCCAAAACCTCCCGAACCTATTTTCTTCTCAAACTTTCTGGTAGC
Malus domestica genome assembly, chromosome: 12.
OU744964.1:18746904-18746923
TCCTTTTCATCCTTCATTTTACCGTAGTAA18746904ACAACTCCAAAACCTCCCGAACCTATTTTCTTCTCAAACTTTCTGGTAGC
Malus domestica genome assembly, chromosome: 12.
OU745002.1:18926834-18926853
TCCTTTTCATCCTTCATTTTACCGTAGTAA18926834ACAACTCCAAAACCTCCCGAACCTATTTTCTTCTCAAACTTTCTGGTAGC
Malus domestica genome assembly, chromosome: 12.
OU745002.1:18938854-18938873
TCCTTTTCATCCTTCATTTTACCGTAGTAA18938854ACAACTCCAAAACCTCCCGAACCTATTTTCTTCTCAAACTTTCTGGTAGC
Malus domestica genome assembly, chromosome: 12.
OU745002.1:18949838-18949857
TCCTTTTCATCCTTCATTTTACCGTAGTAA18949838ACAACTCCAAAACCTCCCGAACCTATTTTCTTCTCAAACTTTCTGGTAGC
Vicia faba genome assembly, chromosome: 3.
OX451738.1:326741029-326741048
TCTTTTCCATTTGTCTGTTTCCCATAGTAA326741029ACAACTCCAAAACCTCCCGAACCAATTTTTTTCTCGAAATTATTAGTATA
Comarum palustre genome assembly, chromosome: 7.
OX637578.1:21343103-21343122
TCCTTTCCATCTTTTGTTTTACCATAGTAA21343103ACAACTCCAAAACCTCCCGAACCTATTTTCTTCTCAAAATTTCTAGTAGC
Sciurus vulgaris genome assembly, chromosome: 2.
LR738612.1:23637712-23637731
GCTGACCTCAGATTCTTGAGCAATAACTCT23637712TCGGGAGGTTTTGGAGTTGTTCTGTTATGCAGCAGTTTTATAGCTAGAGC
Mdst6021h03.y2 Mdst Malus domestica cDNA clone Mdst6021h03 5' similar to TR:Q9ZQC2 Q9ZQC2 PUTATIVE RECEPTOR PROTEIN KINASE, mRNA sequence.
CV986744.1:255-274
GCTACCAGAAAGTTTGAGAAGAAAATAGGT255TCGGGAGGTTTTGGAGTTGTTTACTACGGTATAATGAAGGATGAAAAGGA
Fragaria x ananassa cultivar Benihoppe chromosome 24.
CP139752.1:8544519-8544538
GCTACTAGAAAGTTTGAGAAGAAAATAGGT8544519TCGGGAGGTTTTGGAGTTGTTTACTATGGTAAAACAAAAGATGGAAAGGA
Fragaria x ananassa cultivar Benihoppe chromosome 22.
CP139754.1:8667240-8667259
GCTACTAGAAAGTTTGAGAAGAAAATAGGT8667240TCGGGAGGTTTTGGAGTTGTTTACTATGGTAAAACAAAAGATGGAAAGGA
Fragaria x ananassa cultivar Benihoppe chromosome 21.
CP139755.1:9048219-9048238
GCTACTAGAAAGTTTGAGAAGAAAATAGGT9048219TCGGGAGGTTTTGGAGTTGTTTACTATGGTAAAACAAAAGATGGAAAGGA
Malus hybrid cultivar cultivar Flame chromosome 12.
CP141921.1:12818540-12818559
GCTACCAGAAAGTTTGAGAAGAAAATAGGT12818540TCGGGAGGTTTTGGAGTTGTTTACTACGGTAAAATGAAGGATGAAAAGGA
Malus hybrid cultivar cultivar Flame chromosome 12.
CP141938.1:12964390-12964409
GCTACCAGAAAGTTTGAGAAGAAAATAGGT12964390TCGGGAGGTTTTGGAGTTGTTTACTACGGTATAATGAAGGATGAAAAGGA
Malus hybrid cultivar cultivar Flame chromosome 12.
CP141938.1:12973144-12973163
GCTACCAGAAAGTTTGAGAAAAAAATAGGT12973144TCGGGAGGTTTTGGAGTTGTTTACTACGGTAAAATGAAGGATGAAAAGGA
Malus hybrid cultivar cultivar Flame chromosome 12.
CP141938.1:12986822-12986841
GCTACCAGAAAGTTTGAGAAGAAAATAGGT12986822TCGGGAGGTTTTGGAGTTGTTTACTACGGTAAAATGAAGGATGAAAAGGA
Medicago arabica genome assembly, chromosome: 8.
OX326971.1:18091381-18091400
GCAACCGATAACTATTCCTACCGGTTGGGA18091381TCGGGAGGTTTTGGAGTTGTTTATAAAGGAAGTTTAAGTGATGGAACCAT
Medicago lupulina genome assembly, chromosome: 1.
OY283139.1:18221945-18221964
GCAACCGATAACTATTCCTACTGGTTGGGA18221945TCGGGAGGTTTTGGAGTTGTTTATAAAGGAAGTTTTAGTAATGGAACCAT
Medicago lupulina genome assembly, chromosome: 1.
OY283139.1:18228049-18228068
GCAACCGATAACTATTCCTACCGGTTGGGA18228049TCGGGAGGTTTTGGAGTTGTTTATAAAGGAAGTTTAAGTGATGGAACCAT
Malus x robusta genome assembly, chromosome: 13.
OY720337.1:12900348-12900367
GCTACCAGAAAGTTTGAGAAGAAAATAGGT12900348TCGGGAGGTTTTGGAGTTGTTTACTACGGTAAAATGAAGGATGAAAAGGA
Crataegus laevigata genome assembly, chromosome: 15.
OY756952.1:13216538-13216557
GCTACCAGAAAGTTTGAGAAGAAAATAGGT13216538TCGGGAGGTTTTGGAGTTGTTTACTATGGTAAAATGAAGGATGAAAAGGA
Crataegus laevigata genome assembly, chromosome: 15.
OY756952.1:13321057-13321076
GCTACCAGAAAGTTTGAGAAGAAAATAGGT13321057TCGGGAGGTTTTGGAGTTGTTTACTACGGTAAAATGAAGGATGAAAAGGA
Pyrus communis genome assembly, chromosome: 9.
OY757076.1:9728933-9728952
GCTACCAGAAAGTTTGAGAAGAAAATAGGT9728933TCGGGAGGTTTTGGAGTTGTTTACTACGGTAAAATGAAGGATGAAAAGGA
Salticus scenicus genome assembly, chromosome: 7.
OZ005654.1:234147707-234147726
GCCTTAGTCAGGATTTTCATAAATGTTTTT234147707TCGGGAGGTTTTGGAGTTGTTACTCTACGGTAGAGGTCAAGACTTACAAT
Acleris laterana genome assembly, chromosome: 1.
OZ014439.1:17099528-17099547
TAGATTTCTGGTTACAGAGCTTAGTTTTGC17099528TCGGGAGGTTTTGGAGTTGTTAGTAGTTAAACAAGGCTAGAGCTGAGTTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACAACTCCAAAACCTCCCGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACAACTCCAAAACCTCCCGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.305 | 0.296 | search_plus_done; http://172.18.8.135:50400/match?q=ACAACTCCAAAACCTCCCGA&k=0&no_gap=0&offset=0&limit=50
0.453 | 0.148 | search_minus_done; http://172.18.8.135:50400/match?q=TCGGGAGGTTTTGGAGTTGT&k=0&no_gap=0&offset=0&limit=21
0.464 | 0.012 | cgi_end;

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