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Database:

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-10 07:29:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Epinephelus fuscoguttatus DNA, LG20, complete sequence.
AP022694.1:12298839-12298858
GTAGGTCCTAACTTTGATCACAAGACCGTG12298839ACAATGGCCATACTTGAACCTCTCTCACTGTGCGGCGTGGGAGAGCCCAA
GA__Ed0087F01r Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Ed0087F01r, mRNA sequence.
BQ414505.1:65-84
TTGAACTTTTAGTTAGTAACTAAACATAAA65ACAATGGCCATACTTGAACCTTGTATAGGAAGTTCAATTTTCCCCCACTC
GR__Eb0042N18.f GR__Eb Gossypium raimondii cDNA clone GR__Eb0042N18 5', mRNA sequence.
CO110119.1:96-115
AGGCACTTTTAGTTAGTAACTACACATAAA96ACAATGGCCATACTTGAACCTTGTATAGGAAGTTCAACTTTCCCCCACTC
GH_HYPT_01-01-16R_D12_InvR_22Apr04_090_R Stem - 3 weeks after planting Gossypium hirsutum cDNA, mRNA sequence.
DW226051.1:116-135
AGGCACTTTTAGTTAGTAACTACACATAAA116ACAATGGCCATACTTGAACCTTGTATAGGAAGTTCAACTTTCCCCCACTC
Gossypium raimondii isolate D5-4 chromosome D5_02.
CP032554.1:746577-746596
AGGCACTTTTAGTTAGTAACTACACATAAA746577ACAATGGCCATACTTGAACCTTGTATAGGAAGTTCAACTTTCCCCCACTC
Gossypium turneri isolate D10-2 chromosome D10_02.
CP032572.1:703144-703163
AGGCACTTTTAGTTAGTAACTACACATAAA703144ACAATGGCCATACTTGAACCTTGTATAGGAAGTTCAACTTTCCCCCACTC
Gossypium herbaceum isolate GPA1alz chromosome 2.
CP106707.1:748783-748802
TTGAACTTTTAGTTAGTAACTAAACATAAA748783ACAATGGCCATACTTGAACCTTGTATAGGAAGTTCAATTTTCCCCCACTC
Cydalima perspectalis genome assembly, chromosome: 3.
OX596202.1:6036034-6036053
TCGCTTGTTGAATAAAGAGTGCTTCGCCCA6036034ACAATGGCCATACTTGAACCGTTAGCTTTCGTGTAAAGAGGTGGTTATGA
Epinephelus fuscoguttatus DNA, LG23, complete sequence.
AP022697.1:31950198-31950217
GATGGTGGGCCTAAGTCGCACAGTGAGAGA31950198GGTTCAAGTATGGCCATTGTCACGCTCTTGCGATCAAAGACAGCCTGGGA
GA__Eb0007F01f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Eb0007F01f, mRNA sequence.
BF270201.2:312-331
GAGTGGGGGAAAATTGAACTTCCTATACAA312GGTTCAAGTATGGCCATTGTTTTATGTTTAGTTACTAACTAAAAGTTCAA
GR__Ea49I10.r GR__Ea Gossypium raimondii cDNA clone GR__Ea49I10 3', mRNA sequence.
CO084098.1:759-778
GAGTGGGGGAAAGTTGAACTTCCTATACAA759GGTTCAAGTATGGCCATTGTTTTATGTGTAGTTACTAACTNAAAGTGCCT
GR__Eb0042N18.r GR__Eb Gossypium raimondii cDNA clone GR__Eb0042N18 3', mRNA sequence.
CO110120.1:459-478
GAGTGGGGGAAAGTTGAACTTCCTATACAA459GGTTCAAGTATGGCCATTGTTTTATGTGTAGTTACTAACTAAAAGTGCCT
GH_TMIRS_076_D06_F Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequence.
DW503659.1:718-737
GAGTGGGGGAAAGTTGAACTTCCTATACAA718GGTTCAAGTATGGCCATTGTTTTATGTGTAGTTACTAACTA
Gossypium herbaceum isolate Zhongcao1 chromosome 2.
CP106694.1:94112676-94112695
GAGTGGGGGAAAATTGAACTTCCTATACAA94112676GGTTCAAGTATGGCCATTGTTTTATGTTTAGTTACTAACTAAAAGTTCAA
Gossypium bickii isolate GPG1lz chromosome 2.
CP106718.1:107241527-107241546
GAGTGGGGGAAAGTTGAACTTCCTATACAA107241527GGTTCAAGTATGGCCATTGTTTTATGTGTAGTTACTAACTAAAAGTGCCT
Gossypium rotundifolium isolate GPK201 chromosome 2.
CP106723.1:138818775-138818794
GTGTGGGGGAAAGTTGAACTTCCTATACAA138818775GGTTCAAGTATGGCCATTGTTTTATGTGTAGTTACTAACTAAAAGTGCCT
Oxycera nigricornis genome assembly, chromosome: 3.
OZ012661.1:68113572-68113591
GAGCATCCATTGGCTTTCATTTCTGTGTAT68113572GGTTCAAGTATGGCCATTGTACATCATATACAACTGAAGTAACGAATTGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

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