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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-05 09:26:15, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Rhinatrema bivittatum genome assembly, chromosome: 6.
LR584392.1:120762175-120762194
CACAGATTAGAGTTATGACAGTGTCACAAT120762175ACACCAATATCTGGGCACAAGAGGACTCTAATGCTGTGTTCGTCTTGGGA
TSA: Allium cepa CUDHLF2_20752 mRNA sequence.
JR863570.1:174-193
TGAATCAGAAAAACAGAACAAATAAAGCAG174ACACCAATATCTGGGCACAACTAAAGACTAGAAACGTGGCTGGTAATCAC
Eilema griseolum genome assembly, chromosome: 9.
OY759238.1:5027029-5027048
ATGTGAATGCCATCAACAGTGACCTTGAAA5027029ACACCAATATCTGGGCACAATCTTTTGGACTGCAGGTCAACCAAAAAAAT
Allium cepa genome assembly, chromosome: 7.
LR994635.1:46023193-46023212
GTGATTACCAGCCACGTTTCTAGTCTTTAG46023193TTGTGCCCAGATATTGGTGTCTGCTTTATTTGTTCTGTTTTTCTGATTCA
Spirometra erinaceieuropaei genome assembly, scaffold: SPER_scaffold0016733.
LN016974.1:6067-6086
TCATAATGTTGTTATTTATTAACGTAGATA6067TTGTGCCCAGATATTGGTGTCGGTTTGCAGGTGGTCAACGATCATTTGCG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACACCAATATCTGGGCACAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACACCAATATCTGGGCACAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.367 | 0.359 | search_plus_done; http://172.18.8.135:50400/match?q=ACACCAATATCTGGGCACAA&k=0&no_gap=0&offset=0&limit=50
0.492 | 0.124 | search_minus_done; http://172.18.8.135:50400/match?q=TTGTGCCCAGATATTGGTGT&k=0&no_gap=0&offset=0&limit=47
0.493 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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