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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-02 21:56:04, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Allium cepa CUDHLF2_20752 mRNA sequence.
JR863570.1:174-193
TGAATCAGAAAAACAGAACAAATAAAGCAG174ACACCAATATCTGGGCACAACTAAAGACTAGAAACGTGGCTGGTAATCAC
Xanthium orientale genome assembly, chromosome: 7.
OZ186461.1:49298825-49298844
ACTCACCCACAAGGTGACTATCAGACCTTA49298825ACACCAATATCTGGGCACAAGAGTCTTGGAACCAAAACTTTCAATTCTTC
Eilema griseolum genome assembly, chromosome: 9.
OY759238.1:5027029-5027048
ATGTGAATGCCATCAACAGTGACCTTGAAA5027029ACACCAATATCTGGGCACAATCTTTTGGACTGCAGGTCAACCAAAAAAAT
Rhinatrema bivittatum genome assembly, chromosome: 6.
LR584392.1:120762175-120762194
CACAGATTAGAGTTATGACAGTGTCACAAT120762175ACACCAATATCTGGGCACAAGAGGACTCTAATGCTGTGTTCGTCTTGGGA
Allium cepa genome assembly, chromosome: 7.
LR994635.1:46023193-46023212
GTGATTACCAGCCACGTTTCTAGTCTTTAG46023193TTGTGCCCAGATATTGGTGTCTGCTTTATTTGTTCTGTTTTTCTGATTCA
Spirometra erinaceieuropaei genome assembly, scaffold: SPER_scaffold0016733.
LN016974.1:6067-6086
TCATAATGTTGTTATTTATTAACGTAGATA6067TTGTGCCCAGATATTGGTGTCGGTTTGCAGGTGGTCAACGATCATTTGCG
Bombina variegata genome assembly, chromosome: 4.
OZ123718.1:808374057-808374076
GCATAAAAACAAACCAACCAAAAACACAAA808374057TTGTGCCCAGATATTGGTGTAATGGTGTTTCTATGGCACAGGAACTACTA
Bombina variegata genome assembly, chromosome: 4.
OZ123730.1:833989787-833989806
GCATAAAAACAAACCAACCAAAAACACAAA833989787TTGTGCCCAGATATTGGTGTAATGGTGTTTCTATGGCACAGGAACTACTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACACCAATATCTGGGCACAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACACCAATATCTGGGCACAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.113 | 0.104 | search_plus_done; http://172.18.8.135:50800/match?q=ACACCAATATCTGGGCACAA&k=0&no_gap=0&offset=0&limit=50
0.138 | 0.025 | search_minus_done; http://172.18.8.135:50800/match?q=TTGTGCCCAGATATTGGTGT&k=0&no_gap=0&offset=0&limit=46
0.141 | 0.003 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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