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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 12:50:52, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Nibea albiflora genome assembly, chromosome: 2.
LR699025.1:14249373-14249392
TTTTTTCCTGACACAGAGGAGTAAACTCAC14249373ACACCTGAAGGAGAGCCGTAATTCTCATGTCCTTTCAAAGCACAAGAGAT
Arachis hypogaea cultivar Shitouqi chromosome B08.
CP031000.1:80962568-80962587
CGTTGTTTAAATGACGCTATCCCAAGGAAG80962568ACACCTGAAGGAGAGCCGTAATGGCCTCATCTTCGGCAGGCTCCTCCGGT
Arachis hypogaea cultivar Shitouqi chromosome B10.
CP031002.1:66164727-66164746
AACGGAGGAGCCTACCGAAGATTAGGCCAT66164727TACGGCTCTCCTTCAGGTGTCCTCCTCGTGATAGCGTCATTTAAAGAACG
Arachis ipaensis cultivar K30076 chromosome 10.
CP049901.1:65952800-65952819
AACGGAGGAGCCTACCGAAGATTAGGCCAT65952800TACGGCTCTCCTTCAGGTGTCCTCCTCGTGATAGCGTCATTTAAAGAACG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACACCTGAAGGAGAGCCGTA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACACCTGAAGGAGAGCCGTA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.236 | 0.227 | search_plus_done; http://172.18.8.135:50400/match?q=ACACCTGAAGGAGAGCCGTA&k=0&no_gap=0&offset=0&limit=50
0.323 | 0.086 | search_minus_done; http://172.18.8.135:50400/match?q=TACGGCTCTCCTTCAGGTGT&k=0&no_gap=0&offset=0&limit=48
0.324 | 0.002 | cgi_end;

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