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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-12 16:22:02, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Apis mellifera isotig03525.Amellarv mRNA sequence.
HP477640.1:224-243
GAAACTAGTCGGGGGACAAAACGCGATACC224ACACGAGTTTCCTTGGATGGTGAGCATCAGCAGAAAAGGAGGACACTTCT
TSA: Apis mellifera isotig03526.Amellarv mRNA sequence.
HP477641.1:224-243
GAAACTAGTCGGGGGACAAAACGCGATACC224ACACGAGTTTCCTTGGATGGTGAGCATCAGCAGAAAAGGAGGACACTTCT
Arachis hypogaea cultivar Shitouqi chromosome A10.
CP030992.1:93211707-93211726
ATTTGGCATGAGCATTTGAAATTATCTGAG93211707ACACGAGTTTCCTTGGATGGATGCAGTGGCTTGCCACCACTTGCTCAGGT
Pieris napi genome assembly, chromosome: 1.
HG993162.1:13135552-13135571
CCGGATTTACGGAGGAAAATCTGCTGAGTT13135552ACACGAGTTTCCTTGGATGGCGCTTATATCTACTATTATAGGTATATACA
Nomada fabriciana genome assembly, chromosome: 9.
OU015696.1:7952596-7952615
AAGACTGGTCGGTGGACAGAACGCGATACC7952596ACACGAGTTTCCTTGGATGGTGAGCATCAGCAGAAAAGGAGGACACTTCT
Nomada fucata genome assembly, chromosome: 5.
OX411279.1:8481117-8481136
GAGACTGGTCGGTGGACAAAACGCGATACC8481117ACACGAGTTTCCTTGGATGGTGAGCATCAGCAGAAAAGGAGGACACTTCT
Nomada flava genome assembly, chromosome: 9.
OX637909.1:8066156-8066175
AAGACTGGTCGGTGGACAAAACGCGATACC8066156ACACGAGTTTCCTTGGATGGTGAGCATCAGCAGAAAAGGAGGACACTTCT
Nomada hirtipes genome assembly, chromosome: 12.
OX637927.1:8224584-8224603
AAGACTGGTCGGTGGACAAAACGCGATACC8224584ACACGAGTTTCCTTGGATGGTGAGCATCAGCAGAAAAGGAGGACACTTCT
Nomada ferruginata genome assembly, chromosome: 8.
OY757220.1:8341936-8341955
AAGACTGGTCGGTGGACAAAACGCGATACC8341936ACACGAGTTTCCTTGGATGGTGAGCATCAGCAGAAAAGGAGGACACTTCT
Nomada lathburiana genome assembly, chromosome: 7.
OY763903.1:3267845-3267864
AAGACTGGTCGGTGGACAAAACGCGATACC3267845ACACGAGTTTCCTTGGATGGTGAGCATCAGCAGAAAAGGAGGACACTTCT
Andrena chrysosceles genome assembly, chromosome: 2.
OY979767.1:109592820-109592839
GAGGCTGGTCGGCGGAGAGAACGCGATACC109592820ACACGAGTTTCCTTGGATGGTGAGCATCAGCAGGAAAGGAGGACACTTCT
Arachis hypogaea DNA, clone: AHGS49D07.
DH961693.1:431-450
ACCTGAGCAAGTGGTGGCAAGCCACTGCAT431CCATCCAAGGAAACTCGTGTCTCAGATAATTTCAAATGCTCATGCCAAAT
Pieris napi genome assembly, chromosome: 1.
FR997694.1:1816493-1816512
TGTATATACCTATAAAAGTAGATATAAGCG1816493CCATCCAAGGAAACTCGTGTAACTCAGCAGATTTTCCTCCGTAAATCCGG
Nomada panzeri genome assembly, chromosome: 6.
OX637835.1:11419911-11419930
AGAAGTGTCCTCCTTTTCTGTTGATGCTCA11419911CCATCCAAGGAAACTCGTGTGGTATCGCGTTTTGTCCACCGACCAGTCTT
Nomada ruficornis genome assembly, chromosome: 7.
OX637852.1:8341694-8341713
AGAAGTGTCCTCCTTTTCTGCTGATGCTCA8341694CCATCCAAGGAAACTCGTGTGGTATCGCGTTTTGTCCACCGACCAGTCTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACACGAGTTTCCTTGGATGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACACGAGTTTCCTTGGATGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.203 | 0.194 | search_plus_done; http://172.18.8.135:50400/match?q=ACACGAGTTTCCTTGGATGG&k=0&no_gap=0&offset=0&limit=50
0.337 | 0.134 | search_minus_done; http://172.18.8.135:50400/match?q=CCATCCAAGGAAACTCGTGT&k=0&no_gap=0&offset=0&limit=39
0.340 | 0.003 | cgi_end;

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