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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
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2025-04-03 15:20:56, GGGenome : DDBJ release 134.0 (Mar, 2024)

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rmhcyb0_000365 SSH library of differentially expressed genes response to medium changes during cotton somatic embryogenesis Gossypium hirsutum cDNA clone rmhcyb0_000365, mRNA sequence.
FG551397.1:404-423
CTCGAATGAAGGCTCTGAACCTCAGAAAGA404ACACGTCCCCAAAAGTTCACCGACTTTTGCACTTATTTACAGCGAGAAAA
Gossypium hirsutum clone BAC Chr11_10_CM140_NAU1232 sequence, *** SEQUENCING IN PROGRESS ***, 10 unordered pieces.
MW008618.1:46705-46724
CTCGAATGAAGGCTCTGAACCTAAGTAAGA46705ACACGTCCCCAAAAGTTCACCGACTTTTGCACTTATTTACAGCGAGAAAA
Gossypioides kirkii chromosome KI_11.
CP032253.1:53062031-53062050
CTCAAATGAAGGCTCTGAACCTTGGTAAGA53062031ACACGTCCCCAAAAGTTCACCGACTTTTGCACTTATTTACAGTGAGAAAA
Gossypium turneri isolate D10-2 chromosome D10_07.
CP032577.1:34551995-34552014
CTCGAATGACGGCTCTGAACCTCAGTAAGA34551995ACACGTCCCCAAAAGTTCACCGACTTTTGCACTTATTTACAGCGAGGAAA
Gossypium turneri isolate D10-2 chromosome D10_11.
CP032581.1:65660896-65660915
CTCGAATGAAGGCTCTGAACCTCAGTAAGA65660896ACACGTCCCCAAAAGTTCACCGACTTTTGCACTTATTTACAGCGAGAAAA
Gossypium herbaceum isolate GPA1alz chromosome 11.
CP106704.1:123220330-123220349
CTCGAATGAAGGCTCTGAACCTAAGTAAGA123220330ACACGTCCCCAAAAGTTCACCGACTTTTGCACTTATTTACAGCGAGAAAA
Gossypium bickii isolate GPG1lz chromosome 11.
CP106711.1:131953837-131953856
CTCGAATGAAGGCTCTGAACCTCAGTAAGA131953837ACACGTCCCCAAAAGTTCACCGACTTTTGCACTTATTTACAGCTGAGAAA
Gossypium rotundifolium isolate GPK201 chromosome 11.
CP106732.1:1277714-1277733
CTCGAATGAAGGCTCTGAACCTCAGTAAGA1277714ACACGTCCCCAAAAGTTCACCGACTTTTACACTTATTTCCAGCGAGAAAA
Dasypolia templi genome assembly, chromosome: Z.
OY743136.1:8310969-8310988
ACGTGACATAGAAAAGTGAAACTCCTAATA8310969ACACGTCCCCAAAAGTTCACTAATACGAAACACTTTATCGAATGCACGCT
GA__Ea0017A10f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Ea0017A10f, mRNA sequence.
BG442345.1:515-534
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG515GTGAACTTTTGGGGACGTGTTCTTACTTAGGTTCAGAGCCTTCATTCGAG
GR__Eb013I20.r GR__Eb Gossypium raimondii cDNA clone GR__Eb013I20 3', mRNA sequence.
CO113358.1:94-113
TTTTCTCGCTGTCCATAAGTGCAAAAGTCG94GTGAACTTTTGGGGACGTGTTCTTACTGAGGTTCAGAGCCTTCATTCGAG
GR__Eb019B17.r GR__Eb Gossypium raimondii cDNA clone GR__Eb019B17 3', mRNA sequence.
CO116714.1:105-124
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG105GTGAACTTTTGGGGACGTGTTCTTACTGAGGTTCAGAGCCTTCATTCGAG
GR__Eb03H12.f GR__Eb Gossypium raimondii cDNA clone GR__Eb03H12 5', mRNA sequence.
CO122022.1:89-108
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG89GTGAACTTTTGGGGACGTGTTCTTACTGAGGTTCAGAGCCTTCATTCGAG
G.hir-8-10 DAA bolls drought stressed751 8-10 DAA cotton bolls from drought stressed plants Gossypium hirsutum cDNA, mRNA sequence.
DN803875.1:99-118
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG99GTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAG
CM053F01 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence.
DR457278.1:93-112
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG93GTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAG
EST1056282 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT545642.1:111-130
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG111GTGAACTTTTGGGGACGTGTTCTTACTTAGGTTCAGAGCCTTCATTCGAG
EST1057359 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT546719.1:102-121
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG102GTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAG
EST1057622 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT546982.1:126-145
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG126GTGAACTTTTGGGGACGTGTTCTTACTTAGGTTCAGAGCCTTCATTCGAG
EST1057623 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT546983.1:126-145
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG126GTGAACTTTTGGGGACGTGTTCTTACTTAGGTTCAGAGCCTTCATTCGAG
EST1058420 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT547780.1:74-93
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG74GTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAG
EST1058421 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT547781.1:74-93
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG74GTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAG
EST1066073 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT555433.1:84-103
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG84GTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAG
EST1070549 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT559909.1:136-155
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG136GTGAACTTTTGGGGACGTGTTCTTACTTAGGTTCAGAGCCTTCATTCGAG
EST1075090 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT564450.1:114-133
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG114GTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAG
EST1077564 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT566924.1:75-94
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG75GTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAG
EST1078340 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT567700.1:101-120
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG101GTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAG
EST1078374 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT567734.1:114-133
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG114GTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAG
EST1079933 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT569293.1:120-139
TTTTCTCGCTGTAAATAAGTGCAAGAGTCG120GTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAG
EST1080614 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT569974.1:104-123
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG104GTGAACTTTTGGGGACGTGTTCTTACTTAGGTTCAGAGCCTTCATTCGAG
EST1082112 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT571472.1:78-97
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG78GTGAACTTTTGGGGACGTGTTCTTACTTAGGTTCAGAGCCTTCATTCGAG
EST1084188 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT573548.1:59-78
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG59GTGAACTTTTGGGGACGTGTTCTTACTTAGGTTCAGAGCCTTCATTCGAG
UFL_505_29 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES799024.1:94-113
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG94GTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAG
UFL_340_53 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES832495.1:115-134
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG115GTGAACTTTTGGGGACGTGTTCTTACTTAGGTTCAGAGCCTTCATTCGAG
UFL_692_81 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES850376.1:84-103
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG84GTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAG
127D08 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence.
EV487790.1:86-105
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG86GTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAG
sg152C05 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence.
EV498890.1:117-136
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG117GTGAACTTTTGGGGACGTGTTCTTACTTAGGTTCAGAGCCTTCATTCGAG
F07_P-31_061 Cotton 1-14 day post anthesis Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence.
EX164129.1:74-93
TCCANAGAATTCGGCACGAGGCNTTANTCG74GTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAG
H11_P10_094 Cotton 1-14 day post anthesis Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence.
EX165154.1:128-147
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG128GTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAG
EST006598 Gossypium barbadense L. line 3-79 fiber normalized cDNA library Gossypium barbadense cDNA clone 32-D23 5', mRNA sequence.
GR713398.1:123-142
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG123GTGAACTTTTGGGGACGTGTTCTTACTGAGGTTCAGAGCCTTCATTCGAG
1P6-7-H2-T3 Subtracted cDNA library from Gossypium hirsutum L. variety Bikaneri Narma Gossypium hirsutum cDNA, mRNA sequence.
JG453112.1:75-94
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG75GTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAG
mhczaa0_003401.z1.scf cDNA Library of Shixiya I in the Whole-life Cycle Gossypium arboreum cDNA clone mhczaa0_003401.z1, mRNA sequence.
JG852555.1:254-273
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG254GTGAACTTTTGGGGACGTGTTCTTACTTAGGTTCAGAGCCTTCATTCGAG
A03-058A3 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK790732.1:241-260
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG241GTGAACTTTTGGGGACGTGTTCTTACTTAGGTTCAGAGCCTTCATTTGAG
A01-089A1 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK790845.1:136-155
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG136GTGAACTTTTGGGGACGTGTTCTTACTTAGGTTCAGAGCCTTCATTTGAG
B04-36B04 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK791227.1:155-174
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG155GTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAG
E11-77E11 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK793253.1:155-174
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG155GTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAG
H01-071H1 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK794365.1:155-174
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG155GTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAG
F02-14-F02 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK794712.1:159-178
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG159GTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAG
C03-083C3 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK795066.1:155-174
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG155GTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAG
ndcxb0_0001_G01.ab1 Upland cotton seedling roots at salt stress 3h (ndcxb) Gossypium hirsutum cDNA 5', mRNA sequence.
JZ371299.1:284-303
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG284GTGAACTTTTGGGGACGTGTTCTTTCTGAGGTTCAGAGCCTTCATTCGAG
ndcxc0_0023_D11.ab1 Upland cotton seedling roots at 0h control (ndcxc) Gossypium hirsutum cDNA 5', mRNA sequence.
JZ375803.1:128-147
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG128GTGAACTTTTGGGGACGTGTTCTTACTTAGGTTCAGAGCCTTCATTTGAG
Gossypium raimondii isolate D5-4 chromosome D5_11.
CP032563.1:2962784-2962803
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG2962784GTGAACTTTTGGGGACGTGTTCTTACTGAGGTTCAGAGCCTTCATTCGAG
Gossypium herbaceum isolate Zhongcao1 chromosome 11.
CP106686.1:3062593-3062612
TTTTCTCGCTGTAAATAAGTGCAAAAGTCG3062593GTGAACTTTTGGGGACGTGTTCTTACTTAGGTTCAGAGCCTTCATTCGAG
Harmonia axyridis genome assembly, chromosome: 5.
OU611931.1:5732962-5732981
ACTTCAATATAAAGGATGTTTCAAAATTAC5732962GTGAACTTTTGGGGACGTGTTGGTATGACTAATTTGCTGTCGTTTGAGCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACACGTCCCCAAAAGTTCAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACACGTCCCCAAAAGTTCAC | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.250 | 0.241 | search_plus_done; http://172.18.8.135:50400/match?q=ACACGTCCCCAAAAGTTCAC&k=0&no_gap=0&offset=0&limit=50
2.706 | 2.456 | search_minus_done; http://172.18.8.135:50400/match?q=GTGAACTTTTGGGGACGTGT&k=0&no_gap=0&offset=0&limit=41
2.734 | 0.028 | cgi_end;

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