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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-03-14 19:13:16, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

RS2EZ73JQ RS2(RS) Raphanus sativus cDNA 3', mRNA sequence.
FD573436.1:51-72
CTAGCTAACTACTAGTATTGAATCTGAAGT51ACACGTTCACCAGCCTCTAATCCAACTAAGACAGTTAAGTTTCTTAATAGTA
RR3GA01TF RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence.
FD979240.1:664-685
TTCTGGATAAATGTGTCCAGCTAACTAACT664ACACGTTCACCAGCCTCTAATCCAATTTCTAAGACAGTTAAGTTTCTTAATA
TSA: Raphanus sativus RS24346 mRNA sequence.
JT808893.1:50-71
TTCTGGATAAATGTGTCCAGCTAACTAACT50ACACGTTCACCAGCCTCTAATCCAATTTCTAAGACAGTTAAGTTTCTTAATA
Raphanus sativus cultivar WK10039 clone RsH059P02, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces.
AC255136.1:66636-66657
CCAGCTAACTACTAGTATTGAATCTGAAGT66636ACACGTTCACCAGCCTCTAATCCAATTTCTAAGACAGTTAAGTTTCTTAATA
Raphanus sativus genome assembly, chromosome: 1.
LR778310.1:10589491-10589512
TATTAAGAAACTTAACTGTCTTAGAAATTG10589491GATTAGAGGCTGGTGAACGTGTACTTCAGATTCAATACTAGTAGTTAGCTGG
Raphanus sativus genome assembly, chromosome: 6.
OY743212.1:10589491-10589512
TATTAAGAAACTTAACTGTCTTAGAAATTG10589491GATTAGAGGCTGGTGAACGTGTACTTCAGATTCAATACTAGTAGTTAGCTGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACACGTTCACCAGCCTCTAATC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACACGTTCACCAGCCTCTAATC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.457 | 0.449 | search_plus_done; http://172.18.8.135:50400/match?q=ACACGTTCACCAGCCTCTAATC&k=0&no_gap=0&offset=0&limit=50
0.595 | 0.138 | search_minus_done; http://172.18.8.135:50400/match?q=GATTAGAGGCTGGTGAACGTGT&k=0&no_gap=0&offset=0&limit=46
0.597 | 0.002 | cgi_end;

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