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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-05 12:53:56, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Flame chromosome 16.
CP141942.1:32101789-32101808
AGAGCACAGTTATCAACAGCATATGTTAAA32101789ACACTTTGGGGAGGATGAGACAATTCACTATCAGAAAAACCTATCGAAAA
Malus hybrid cultivar cultivar SH6 chromosome 16.
CP143373.1:32906730-32906749
AGAGCACAGTTATCAACAGCATATGTTAAA32906730ACACTTTGGGGAGGATGAGACAATTCACTATCAGAAAAACCTATCGAAAA
Malus domestica genome assembly, chromosome: 16.
OU744557.1:32884544-32884563
AGAGCACAGTTATCAACAGCATATGTTAAA32884544ACACTTTGGGGAGGATGAGACAATTCACTATCAGAAAAACCTATCGAAAA
Malus domestica genome assembly, chromosome: 16.
OU744968.1:33008021-33008040
AGAGCACAGTTATCAACAGCATATGTTAAA33008021ACACTTTGGGGAGGATGAGACAATTCACTATCAGAAAAACCTATCGAAAA
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:2667198-2667217
GTTTTCGTTTGGTTTTCTGATAGTGAACTA2667198TCTCATCCTCCCCAAAGTGTTTTAACATGTTTTGTTGATAACTGCGCTCT
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141963.1:2740204-2740223
GTTTTCGTTTGGTTTTCTGATAGTGAACTA2740204TCTCATCCTCCCCAAAGTGTTTTAACATGTTTTGTTGATAACTGCGCTCT
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:2660102-2660121
GTTTTCGTTTGGTTTTCTGATAGTGAACTA2660102TCTCATCCTCCCCAAAGTGTTTTAACATGTTTTGTTGATAACTGCGCTCT
Malus domestica Starking Delicious DNA, BAC clone SD-178_L15, complete sequence.
LC360748.1:1305-1324
GTTTTCGTTTGGTTTTCTGATAGTGAACTA1305TCTCATCCTCCCCAAAGTGTTTTAACATGTTTTGTTGATAACTGCGCTCT
Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:2769694-2769713
GTTTTCGTTTGGTTTTCTGATAGTGAACTA2769694TCTCATCCTCCCCAAAGTGTTTTAACATGTTTTGTTGATAACTGCGCTCT
Malus domestica genome assembly, chromosome: 11.
OU696687.1:2758371-2758390
GTTTTCGTTTGGTTTTCTGATAGTGAACTA2758371TCTCATCCTCCCCAAAGTGTTTTAACATGTTTTGTTGATAACTGCGCTCT
Malus domestica genome assembly, chromosome: 11.
OU744552.1:2833066-2833085
GTTTTCGTTTGGTTTTCTGATAGTGAACTA2833066TCTCATCCTCCCCAAAGTGTTTTAACATGTTTTGTTGATAACTGCGCTCT
Malus domestica genome assembly, chromosome: 11.
OU744963.1:2873023-2873042
GTTTTCGTTTGGTTTTCTGATAGTGAACTA2873023TCTCATCCTCCCCAAAGTGTTTTAACATGTTTTGTTGATAACTGCGCTCT
Pulicaria dysenterica genome assembly, chromosome: 2.
OX359289.1:24906800-24906819
ACCCTTCACACGACTTGATCGCAAACCATG24906800TCTCATCCTCCCCAAAGTGTTCCTCCAACATACTTCGGTTGAAATTTTGT
Bromus sterilis genome assembly, chromosome: 1.
OX465595.1:343802353-343802372
ATCTGCAGAGACTTCCCCCCCCCCTCCGGA343802353TCTCATCCTCCCCAAAGTGTCTCCTTGGCCTATGGGAACAGAAGGTAAAT
Bromus sterilis genome assembly, chromosome: 1.
OX465595.1:343836206-343836225
ATCTGCAGAGACTTCCCCCCCCCCTCCGGA343836206TCTCATCCTCCCCAAAGTGTCTCCTTGGCCTATGGGAACAGAAGGTAAAT
Bromus sterilis genome assembly, chromosome: 1.
OX465595.1:343844340-343844359
TCTGCAGAGACTTCCCCCCCCCCCTCCGGA343844340TCTCATCCTCCCCAAAGTGTCTCCTTGGCCTATGGGAACAGAAGGTAAAT
Bromus sterilis genome assembly, chromosome: 1.
OX465595.1:343852492-343852511
ATCTGCAGAGACTTCCCCCCCCCCTCCGGA343852492TCTCATCCTCCCCAAAGTGTCTCCTTGGCCTATGGGAACAGAAGGTAAAT
Bromus sterilis genome assembly, chromosome: 1.
OX465595.1:343860644-343860663
ATCTGCAGAGACTTCCCCCCCCCCTCCGGA343860644TCTCATCCTCCCCAAAGTGTCTCCTTGGCCTATGGGAACAGAAGGTAAAT
Bromus sterilis genome assembly, chromosome: 1.
OX465595.1:343868795-343868814
TATCTGCAGAGACTTCCCCCCCCCTCCGGA343868795TCTCATCCTCCCCAAAGTGTCTCCTTGGCCTATGGGAACAGAAGGTAAAT
Bromus sterilis genome assembly, chromosome: 1.
OX465595.1:343876946-343876965
CTGCAGAGACTTCCCCCCCCCCCCTCCGGA343876946TCTCATCCTCCCCAAAGTGTCTCCTTGGCCTATGGGAACAGAAGGTAAAT
Bromus sterilis genome assembly, chromosome: 1.
OX465595.1:343885098-343885117
ATCTGCAGAGACTTCCCCCCCCCCTCCGGA343885098TCTCATCCTCCCCAAAGTGTCTCCTTGGCCTATGGGAACAGAAGGTAAAT
Bromus sterilis genome assembly, chromosome: 1.
OX465595.1:343950774-343950793
TCTGCAGAGACTTCCCCCCCCCCCTCCGGA343950774TCTCATCCTCCCCAAAGTGTCTCCTTGGCCTATGGGAACAGAAGGTAAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACACTTTGGGGAGGATGAGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACACTTTGGGGAGGATGAGA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.337 | 0.328 | search_plus_done; http://172.18.8.135:50400/match?q=ACACTTTGGGGAGGATGAGA&k=0&no_gap=0&offset=0&limit=50
0.465 | 0.129 | search_minus_done; http://172.18.8.135:50400/match?q=TCTCATCCTCCCCAAAGTGT&k=0&no_gap=0&offset=0&limit=46
0.477 | 0.011 | cgi_end;

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