GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 12:10:01, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Sciurus vulgaris genome assembly, chromosome: 10.
LR738620.1:124170851-124170871
GAATCAACGCCCCCATGGTAGAGGCTAGAA124170851ACAGACATGGGCTCAAATTCTGGTCACTAACTGTGTGATTCTGGGGAAGTC
Hyperoodon ampullatus genome assembly, chromosome: 6.
OX457061.1:13964277-13964297
ATGAGTCAGGCCGGATGGCTTTAGAGTCTC13964277ACAGACATGGGCTCAAATTCTAAGCCTGCCACTTACTAGCTATGTAAGCAT
Macaca fuscata fuscata DNA, clone: MSB2-026C06_F, genomic survey sequence.
AG627991.1:242-262
TGGAGTAACAGAAAGAGCCCTGGCTTTGGG242ACAGACATGGGCTCAAATTCTGGCTCTATTACTCACTATTTCTATGGCTTT
Sciurus carolinensis genome assembly, chromosome: 9.
LR738598.1:19370640-19370660
GACTTCCCCAGAATCACATAGTTAGTGACC19370640AGAATTTGAGCCCATGTCTGTTTCTAGCCTCTACCATGGGGGGCATTTATT
Aporrectodea icterica genome assembly, chromosome: 13.
OY744614.1:36005074-36005094
AACAGAAGAAAGCCTTCGCCTAAAATCGGC36005074AGAATTTGAGCCCATGTCTGTTGCCAGCCGAGTTGCGAGGTTTCGCAAGGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ACAGACATGGGCTCAAATTCT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ACAGACATGGGCTCAAATTCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.110 | 0.101 | search_plus_done; http://172.18.8.135:50400/match?q=ACAGACATGGGCTCAAATTCT&k=0&no_gap=0&offset=0&limit=50
0.137 | 0.027 | search_minus_done; http://172.18.8.135:50400/match?q=AGAATTTGAGCCCATGTCTGT&k=0&no_gap=0&offset=0&limit=47
0.138 | 0.001 | cgi_end;

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