GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 01:22:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

C20L_4_C07_E002.g1 USDA-Tifton Peanut Library C20L Arachis hypogaea cDNA clone C20L-004-51_C07 5', mRNA sequence.
ES757769.1:86-105
TGCAAGGGAACTCTGATTCGGATTTTTGAC86ACAGATAGTGGCACGCTCCTTCAGGAAGTAAGAAGGGGTGCAAATGTGGC
Arachis hypogaea EST, cultivar Minhua6, clone GFBZZHF01C35DU.
LN656121.1:7-26
TTTGAC7ACAGATAGTGGCACGCTCCTTCTAGGAAGTAAGAAGGGGTGCAAATGTGG
TSA: Arachis hypogaea CL10037Contig1.Arhy mRNA sequence.
EZ757426.1:86-105
TGCAAGGGAACTCTGATTCGGATTTTTGAC86ACAGATAGTGGCACGCTCCTTCAGGAAGTAAGAAGGGGTGCAAATGTGGC
TSA: Arachis hypogaea Ahy.Unigene12762 mRNA sequence.
JR553047.1:403-422
TGCAAGGGAACTCTGATTCGGATTTTTGAC403ACAGATAGTGGCACGCTCCTTCAGGAAGTAAGAAGGGGTGCAAATGTGGC
Arachis hypogaea DNA, clone: AHGS43D07.
DH961698.1:146-165
TGCAAGGGAACTCTGATTCGGATTTTTGAC146ACAGATAGTGGCACGCTCCTTCAGGAAGTATGTTCTATGCTGTGTGTGTG
Arachis hypogaea cultivar Shitouqi chromosome A05.
CP030987.1:106133360-106133379
TGCAAGGGAACTCTGATTCGGATTTTTGAC106133360ACAGATAGTGGCACGCTCCTTCAGGAAGTATGTTCTATGCTGTGTGTGTG
Arachis hypogaea DNA, clone: KIAC10F04.
DH964545.1:609-628
CACACACACAGCATAGAACATACTTCCTGA609AGGAGCGTGCCACTATCTGTGTCANAAATCCGAATCAGAGTTCCCTTGCA
Arachis hypogaea DNA, clone: KIAC02E07.
DH964730.1:255-274
CACACACACAGCATAGAACATACTTCCTGA255AGGAGCGTGCCACTATCTGTGTCAAAAATCCGAATCAGAGTTCCCTTGCA
Arachis hypogaea cultivar Shitouqi chromosome B05.
CP030997.1:122903982-122904001
CACACACACAGCATAGAACATACTTCCTGA122903982AGGAGCGTGCCACTATCTGTGTCAAAAATCCGAATCAGAGTTCCCTTGCA
Arachis ipaensis cultivar K30076 chromosome 05.
CP049896.1:129862047-129862066
CACACACACAGCATAGAACATACTTCCTGA129862047AGGAGCGTGCCACTATCTGTGTCAAAAATCCGAATCAGAGTTCCCTTGCA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ACAGATAGTGGCACGCTCCT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ACAGATAGTGGCACGCTCCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.516 | 0.507 | search_plus_done; http://172.18.8.135:50400/match?q=ACAGATAGTGGCACGCTCCT&k=0&no_gap=0&offset=0&limit=50
0.672 | 0.156 | search_minus_done; http://172.18.8.135:50400/match?q=AGGAGCGTGCCACTATCTGT&k=0&no_gap=0&offset=0&limit=44
0.675 | 0.003 | cgi_end;

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