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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 12:15:29, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Cajanus cajan cultivar UPAS 120 contig13077.UPAS mRNA sequence.
EZ630794.1:365-386
GTTCTTCCCAGGGCTGGTGCCACAGAAGAC365ACAGATTCGTCTGAACCTAGACTTCATGTTCATGTTCATGTTCATGTTCATG
Glycine max cultivar Williams 82 chromosome 13.
CP126438.1:18218320-18218341
GTTCTTGCCATGGCTGGTGTCACAAAACAC18218320ACAGATTCGTCTGAACCTAGACGACTTCATCATTTTCATGGCTTGCTGTTAT
Sequence 76503 from patent US 9012723.
HK640157.1:39-60
TGAACAGCAAGCCATGAAAATGATGAAGTC39GTCTAGGTTCAGACGAATCTGTGTGTTCTGTGACACCAGCCATGGCAAGAAC
Sequence 66075 from patent US 9029636.
HK975138.1:39-60
TGAACAGCAAGCCATGAAAATGATGAAGTC39GTCTAGGTTCAGACGAATCTGTGTGTTCTGTGACACCAGCCATGGCAAGAAC
sp58f02.y1 Gm-c1044 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1044-148 5' similar to TR:Q9ZQD5 Q9ZQD5 HYPOTHETICAL PROTEIN, mRNA sequence.
BE474062.1:99-120
TGAACAGCAAGCCATGAAAATGATGAAGTC99GTCTAGGTTCAGACGAATCTGTGTGTTCTGTGACACCAGCCATGGCAAGAAC
GLNBX57TF JCVI-SOY3 Glycine max cDNA 5', mRNA sequence.
FK015182.1:130-151
TGAACAGCAAGCCATGAAAATGATGAAGTC130GTCTAGGTTCAGACGAATCTGTGTGTTCTGTGACACCAGCCATGGCAAGAAC
GLNCL59TF JCVI-SOY3 Glycine max cDNA 5', mRNA sequence.
FK017280.1:176-197
TGAACAGCAAGCCATGAAAATGATGAAGTC176GTCTAGGTTCAGACGAATCTGTGTGTTCTGTGACACCAGCCATGGCAAGAAC
TSA: Cajanus cajan cultivar Asha contig22782.Asha mRNA sequence.
EZ670646.1:244-265
AGAACCCATGAACACGAACATGAACATGAA244GTCTAGGTTCAGACGAATCTGTGTCCTCTGTGGCACCAGCCCTGGGAAGAAC
Soybean clone JCVI-FLGm-16M23 unknown mRNA.
BT097489.1:176-197
TGAACAGCAAGCCATGAAAATGATGAAGTC176GTCTAGGTTCAGACGAATCTGTGTGTTCTGTGACACCAGCCATGGCAAGAAC
Glycine max cultivar Williams 82 chromosome 14.
CP126439.1:52073405-52073426
TGAACAGCAAGCCATGAAAATGATGAAGTC52073405GTCTAGGTTCAGACGAATCTGTGTGTTCTGTGACACCAGCCATGGCAAGAAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ACAGATTCGTCTGAACCTAGAC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ACAGATTCGTCTGAACCTAGAC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.179 | 0.170 | search_plus_done; http://172.18.8.135:50400/match?q=ACAGATTCGTCTGAACCTAGAC&k=0&no_gap=0&offset=0&limit=50
0.628 | 0.449 | search_minus_done; http://172.18.8.135:50400/match?q=GTCTAGGTTCAGACGAATCTGT&k=0&no_gap=0&offset=0&limit=48
0.633 | 0.005 | cgi_end;

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