GGGenome | Results

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2025-04-06 08:32:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Daucus carota subsp. sativus cultivar DH1 chromosome 2.
CP093344.1:47411815-47411835

TAAATCAAATTTCTGATGCTACCTGGCCAT47411815AATGTAGCAAACTGTGGCTGTATAGATTGTAACTGGAATTCCCAAATTTAA

Daucus carota isolate Kuroda chromosome 2.
CP125302.1:45298669-45298689

TAAATCAAATTTCTGATGCTACCTGACCAT45298669AATGTAGCAAACTGTGGCTGTATAAATTATAACTGGAATTCCCAAATTTAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.008 | 0.008 | search_start;
0.103 | 0.094 | search_plus_done; http://172.18.8.135:50400/match?q=ACAGCCACAGTTTGCTACATT&k=0&no_gap=0&offset=0&limit=50
0.128 | 0.025 | search_minus_done; http://172.18.8.135:50400/match?q=AATGTAGCAAACTGTGGCTGT&k=0&no_gap=0&offset=0&limit=50
0.130 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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