GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-10 10:13:25, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome X.
CP130739.1:4279600-4279622
GATGGTTAGCAGCAACTCCTACTCTTTCCA4279600CAGCATCAAATCCATCAGCCTGTTCATAGAATTGTGAAGCCACATGTTATGTC
Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome Y.
CP130887.1:4246005-4246027
GATGGTTAGCAGCAACTCCTACTCTTTCCA4246005CAGCATCAAATCCATCAGCCTGTTCATAGAATTGTGAAGCCACATGTTATGTC
Chenopodium album genome assembly, chromosome: 4.
OX419211.1:3261895-3261917
GATGGTTATCAGCAACTCCAACCCTTTCTA3261895CAGCATCAAATCCATCAGCCTGTTCATAGAGTTGTAAAGTAGTAAGCTACATA
Chenopodium album genome assembly, chromosome: 13.
OX419220.1:3410269-3410291
GATGGTTATCAGCAACTCCAACTCTTTCTA3410269CAGCATCAAATCCATCAGCCTGTTCATTGAGTTGTGAAGTTAGTAAGCTACAT
Chenopodium album genome assembly, chromosome: 22.
OX419229.1:3006805-3006827
GGTGGTTATCAGCAACTCCAACTCTTTCTA3006805CAGCATCAAATCCATCAGCCTGTTCATTGAGTTGTGAAGTTAGTAAGCTATAT
Salicornia ramosissima genome assembly, chromosome: 5.
OX596236.1:51804196-51804218
GATGGTTCGCAGCAACCCCAATTCGTTCTA51804196CAGCATCAAATCCATCAGCCTGTACCACCATACAAAAATCCCGCCACACCATA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ACAGGCTGATGGATTTGATGCTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ACAGGCTGATGGATTTGATGCTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.094 | 0.085 | search_plus_done; http://172.18.8.135:50400/match?q=ACAGGCTGATGGATTTGATGCTG&k=0&no_gap=0&offset=0&limit=50
0.107 | 0.013 | search_minus_done; http://172.18.8.135:50400/match?q=CAGCATCAAATCCATCAGCCTGT&k=0&no_gap=0&offset=0&limit=50
0.111 | 0.004 | cgi_end;

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