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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-08 06:41:56, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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Acomys percivali genome assembly, chromosome: 11.
OU015752.1:26285485-26285504
TTCTGCCTGAGCCTTCTGAGTGCTGGTTTT26285485ACAGGTGTTATGCCAGGAGGTCTGGCTCACTTTAAGATTTTTTTAAACCT
EST253047 tomato resistant, Cornell Solanum lycopersicum cDNA clone cLER1A2, mRNA sequence.
AI771947.1:416-435
GCAAATACAGCAGCTGGTATTGCTGGAGGC416ACAGGTGTTATGCCAGGAGGCAATGTGGGGGCTGACCATGCCGTGTTTGA
EST328035 tomato germinating seedlings, TAMU Solanum lycopersicum cDNA clone cLEI8B20 5', mRNA sequence.
AW649581.1:44-63
GCAAATACAGCAGCTGGTATTGCGGGAGGC44ACAGGTGTTATGCCAGGAGGCAATGTGGGGGCTGACCATGCCGTGTTTGA
028E10 Mature tuber lambda ZAP Solanum tuberosum cDNA 5' similar to NAD-dependent isocitrate dehydrogenase ... emb|CAA74776.1, mRNA sequence.
BF153560.1:263-282
GCAAATACAGCAGCTGGTATTGCTGGAGGC263ACAGGTGTTATGCCAGGAGGCAACGTGGGGGCTGACCATGCCGTGTTTGA
088B05 Mature tuber lambda ZAP Solanum tuberosum cDNA, mRNA sequence.
BG351238.1:388-407
GCAAATACAGCAGCTGGTATTGCTGGAGGC388ACAGGTGTTATGCCAGGAGGCAACGTGGGGGCTGACCATGCCGTGTTTGA
Solanum lycopersicum cDNA, clone: FA28AE09, 5' end, expressed in maturing fruit.
BP884243.1:356-375
GCAAATACAGCAGCTGGTATTGCTGGAGGC356ACAGGTGTTATGCCAGGAGGCAATGTGGGGGCTGACCATGCCGTGTTTGA
Solanum lycopersicum cDNA, clone: FA28BD05, 5' end, expressed in maturing fruit.
BP884314.1:351-370
GCAAATACAGCAGCTGGTATTGCTGGAGGC351ACAGGTGTTATGCCAGGAGGCAATGTGGGGGCTGACCATGCCGTGTTTGA
POR19 Pto overexpressing tomato leaves Solanum lycopersicum cDNA, mRNA sequence.
CB751576.1:393-412
GCAAATACAGCAGCTGGTATTGCTGGAGGC393ACAGGTGTTATGCCAGGAGGCAATGTGGGGGCTGACCATGCCGTGTTTGA
EST727595 potato callus cDNA library, normalized and full-length Solanum tuberosum cDNA clone POCA642 5' end, mRNA sequence.
CK243958.1:853-872
GCAAATACAGCAGCTGGTATTGCTGGAGGC853ACAGGTGTTATGCCAGGAGGCAACGTGGGGGCTGACCATGCCGTGTTTGA
EST729156 potato callus cDNA library, normalized and full-length Solanum tuberosum cDNA clone POCAE89 5' end, mRNA sequence.
CK245519.1:880-899
GCAAATACAGCAGCTGGTATTGCTGGAGGC880ACAGGTGTTATGCCAGGAGGCAACGTGGGGGCTGACCATGCCCGTGTTGA
EST729407 potato callus cDNA library, normalized and full-length Solanum tuberosum cDNA clone POCAG79 5' end, mRNA sequence.
CK245770.1:880-899
GCAAATACAGCAGCTGGTATTGCTGGAGGC880ACAGGTGTTATGCCAGGAGGCAACGTGGGGGCTGACCATGCCGTGTTTGA
EST735395 potato callus cDNA library, normalized and full-length Solanum tuberosum cDNA clone POCBP93 5' end, mRNA sequence.
CK251758.1:865-884
GCAAATACAGCAGCTGGTATTGCTGGAGGC865ACAGGTGTTATGCCAGGAGGCAACGTGGGGGCTGACCATGCCGTGTTTGA
EST715443 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POACM40 5' end, mRNA sequence.
CK269365.1:336-355
GCAAATACAGCAGCTGGTATTGCTGGAGGC336ACAGGTGTTATGCCAGGAGGCAACGTGGGGGCTGACCATGCCGTGTTTGA
EST719476 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POADB08 5' end, mRNA sequence.
CK273398.1:889-908
GCAAATACAGCAGCTGGTATTGCTGGAGGC889ACAGGTGTTATGCCAGGAGGCAACGTGGGGGCTGACCATGCCGTGTTTGA
26503 Suspension culture Solanum tuberosum cDNA, mRNA sequence.
CN212964.1:149-168
GCAAATACAGCAGCTGGTATTGCTGGAGGC149ACAGGTGTTATGCCAGGAGGCAACGTGGGGGCTGACCATGCCGTGTTTGA
29268 Suspension culture Solanum tuberosum cDNA, mRNA sequence.
CN215463.1:349-368
GCAAATACAGCAGCTGGTATTGCTGGAGGC349ACAGGTGTTATGCCAGGAGGCAACGTGGGGGCTGACCATGCCGTGTTTGA
Solanum torvum mRNA, clone: TVR30N02, 5'end, expressed in root at vegetative stage, 2 months after germination.
FS122351.1:214-233
GCAAATACGGCAGCTGGCATTGCTGGAGGC214ACAGGTGTTATGCCAGGAGGCAACGTGGGGGCTGACCATGCTGTGTTTGA
Solanum lycopersicum DNA, clone: MTBAC091E15_SP6.
FT283094.1:434-453
GCAAATACAGCAGCTGGTATTGCTGGAGGC434ACAGGTGTTATGCCAGGAGGTACATGTAATTGACAGTCAGAATTTGTTCT
Solanum lycopersicum cDNA, clone: LEFL1021CB10, HTC in leaf.
AK321208.1:975-994
GCAAATACAGCAGCTGGTATTGCTGGAGGC975ACAGGTGTTATGCCAGGAGGCAATGTGGGGGCTGACCATGCCGTGTTTGA
Capsicum annuum Takanotsume DNA, chromosome 10, sequence.
AP026705.1:168654913-168654932
GCAAATACAGCAGCTGGTATTGCTGGAGGC168654913ACAGGTGTTATGCCAGGAGGTACATATAAGTGACAGTCAGAATTTGTTCT
Solanum dulcamara genome assembly, chromosome: 12.
OX359263.1:13389765-13389784
GCAAATACAGCTGCTGGTATTGCTGGAGGC13389765ACAGGTGTTATGCCAGGAGGTATATATAAGTGACAGTCAAAATTTGTTCT
Rhagium mordax genome assembly, chromosome: 3.
OY796658.1:66283651-66283670
TTATATTTTAAAGAGAAGTGTTTTGTTAGC66283651ACAGGTGTTATGCCAGGAGGAATACTAACAGGAGGCAATAAAAATGGATT
EST727594 potato callus cDNA library, normalized and full-length Solanum tuberosum cDNA clone POCA642 3' end, mRNA sequence.
CK243957.1:506-525
TCAAACACGGCATGGTCAGCCCCCACGTTG506CCTCCTGGCATAACACCTGTGCCTCCAGCAATACCAGCTGCTGTATTTGC
EST729157 potato callus cDNA library, normalized and full-length Solanum tuberosum cDNA clone POCAE89 3' end, mRNA sequence.
CK245520.1:548-567
TCAAACACGGCATGGTCAGCCCCCACGTTG548CCTCCTGGCATAACACCTGTGCCTCCAGCAATACCAGCTGCTGTATTTGC
EST729408 potato callus cDNA library, normalized and full-length Solanum tuberosum cDNA clone POCAG79 3' end, mRNA sequence.
CK245771.1:580-599
TCAAACACGGCATGGTCAGCCCCCACGTTG580CCTCCTGGCATAACACCTGTGCCTCCAGCAATACCAGCTGCTGTATTTGC
EST719477 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POADB08 3' end, mRNA sequence.
CK273399.1:548-567
TCAAACACGGCATGGTCAGCCCCCACGTTG548CCTCCTGGCATAACACCTGTGCCTCCAGCAATACC
EST724261 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POAE447 3' end, mRNA sequence.
CK278183.1:576-595
TCAAACACGGCATGGTCAGCCCCCACGTTG576CCTCCTGGCATAACACCTGTGCCTCCAGCAATACCAGCTGCTGTATTTGC
17383 Swollen Stolon Solanum tuberosum cDNA, mRNA sequence.
CK717522.1:596-615
TCAAACACGGCATGGTCAGCCCCCACGTTG596CCTCCTGGCATAACACCTGTGCCTCCAGCAATACCAGCTGCTGTATTTGC
LH__Ea02B17.f LH__Ea Solanum habrochaites cDNA clone LH__Ea02B17 5', mRNA sequence.
DN167762.1:553-572
TCAAACACGGCATGGTCAGCCCCCACGTTG553CCTCCTGGCATAACACCTGTGCCTCCAGCAATACCAGCTGCTGTATTTGC
43983.3 Common Scab-Challenged Tubers Solanum tuberosum cDNA clone 43983 3', mRNA sequence.
DN922808.1:289-308
TCAAACACGGCATGGTCAGCCCCCACGTTG289CCTCCTGGCATAACACCTGTGCCTCCAGCAATACCAGCTGCTGTATTTGC
Solanum melongena mRNA, clone: SmFL23O14, 3'end.
FS082313.1:503-522
TCAAACACAGCATGGTCAGCCCCCACGTTG503CCTCCTGGCATAACACCTGTGCCTCCAGCAATACCAGCTGCTGTATTTGC
Solanum torvum mRNA, clone: TVR28I21, 3'end, expressed in root at vegetative stage, 2 months after germination.
FS121083.1:537-556
TCAAACACAGCATGGTCAGCCCCCACGTTG537CCTCCTGGCATAACACCTGTGCCTCCAGCAATGCCAGCTGCCGTATTTGC
LH__Ea02B17.r LH_Ea Solanum habrochaites cDNA, mRNA sequence.
GT183923.1:552-571
TCAAACACGGCATGGTCAGCCCCCACGTTG552CCTCCTGGCATAACACCTGTGCCTCCAGCAATACCAGCTGCTGTATTTGC
TSA: Capsicum annuum MGMT_Contig3574, mRNA sequence.
JW053818.1:637-656
TCAAACACAGCATGGTCAGCCCCGACGTTG637CCTCCTGGCATAACACCTGTGCCTCCAGCAATACCAGCTGCTGTATTTGC
Solanum lycopersicum DNA, clone: MTBAC011G23_T7.
FT233492.1:644-663
AGAACAAATTCTGACTGTCAATTACATGTA644CCTCCTGGCATAACACCTGTGCCTCCAGCAATACCAGCTGCTGTATTTGC
Solanum lycopersicum Micro-Tom DNA, chromosome 10, draft genome sequence.
AP028944.1:57060437-57060456
AGAACAAATTCTGACTGTCAATTACATGTA57060437CCTCCTGGCATAACACCTGTGCCTCCAGCAATACCAGCTGCTGTATTTGC
Solanum lycopersicum cultivar I-3 chromosome 10.
CP023766.1:58053162-58053181
AGAACAAATTCTGACTGTCAATTACATGTA58053162CCTCCTGGCATAACACCTGTGCCTCCAGCAATACCAGCTGCTGTATTTGC
Solanum tuberosum cultivar P8 chromosome 10.
CP046683.1:48069275-48069294
AGAACAAATTCTAAYTGTCACTTATATGTA48069275CCTCCTGGCATAACACCTGTGCCTCCAGCAATACCAGCTGCTGTATTTGC
Solanum tuberosum cultivar MSH/14-112 chromosome 10.
CP046694.1:48069112-48069131
AGAACAAATTCTAACTGTCACTTATATGTA48069112CCTCCTGGCATAACACCTGTGCCTCCAGCAATACCAGCTGCTGTATTTGC
Solanum pinnatisectum cultivar CGN17745 chromosome 10.
CP047557.1:48061936-48061955
AGAACAAATTCTAATTGTCACTTATATGTA48061936CCTCCTGGCATAACACCTGTGCCTCCAGCAATACCAGCTGCTGTATTTGC
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 10.
CP124710.1:101309910-101309929
AAAACAAATTCTGAATGTCACTTATATGTA101309910CCTCCTGGCATAACACCTGTGCCTCCAGCAATACCAGCTGCTGTATTTGC
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 10.
CP124722.1:147585830-147585849
AGAACAAATTCTGACTGTCACTTATATGTA147585830CCTCCTGGCATAACACCTGTGCCTCCAGCAATACCAGCTGCTGTATTTGC
Solanum verrucosum cultivar 11H23 chromosome 10.
CP133621.1:45981784-45981803
AGAACAAATTCTAACTGTCACTTAAATGTA45981784CCTCCTGGCATAACACCTGTGCCTCCAGCAATACCAGCTGCTGTATTTGC
Solanum pennellii chromosome ch10, complete genome.
HG975449.1:74586978-74586997
AGAACAAATTCTGACTGTCAATTATATGTA74586978CCTCCTGGCATAACACCTGTGCCTCCAGCAATACCAGCTGCTGTATTTGC
Solanum lycopersicum chromosome ch10, complete genome.
HG975522.1:57377067-57377086
AGAACAAATTCTGACTGTCAATTACATGTA57377067CCTCCTGGCATAACACCTGTGCCTCCAGCAATACCAGCTGCTGTATTTGC
Solanum lycopersicum genome assembly, chromosome: 10.
OU640353.1:58935371-58935390
AGAACAAATTCTGACTGTCAATTACATGTA58935371CCTCCTGGCATAACACCTGTGCCTCCAGCAATACCAGCTGCTGTATTTGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACAGGTGTTATGCCAGGAGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACAGGTGTTATGCCAGGAGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.695 | 0.686 | search_plus_done; http://172.18.8.135:50400/match?q=ACAGGTGTTATGCCAGGAGG&k=0&no_gap=0&offset=0&limit=50
1.550 | 0.855 | search_minus_done; http://172.18.8.135:50400/match?q=CCTCCTGGCATAACACCTGT&k=0&no_gap=0&offset=0&limit=28
1.566 | 0.016 | cgi_end;

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