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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-20 06:39:33, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Medicago truncatula chromosome 7 clone mth2-85d15, complete sequence.
AC157894.3:125738-125765
TGACCTATTAGATTGATCCCCGCGGATAGA125738ACATAAACCAACTTGTGAACAGACGTCACCAGGTTTTACCTGCAGATCAAGATCAAAC
Medicago truncatula EST MtBA07B03F1 : T3 end of clone MtBA07B03 of cDNA library MtBA from root tips of cultivar Jemalong of Medicago truncatula (barrel medic).
AL366351.1:24-51
CTAGTATCAGGGGTAAAACCTGG24TGACGTCTGTTCACAAGTTGGTTTATGTTCTATCCGCGGGGATCAATCTAATAGTGCT
Medicago truncatula EST MtBA38G11F1 : T3 end of clone MtBA38G11 of cDNA library MtBA from root tips of cultivar Jemalong of Medicago truncatula (barrel medic).
AL370603.1:416-443
GGATCTCCTAGTATCAGGGGTAAAACCTGG416TGACGTCTGTTCACAAGTTGGTTTATGTTCTATCCGCGGGGATCAATCTAA
Medicago truncatula EST MtBC42C09F1 : T3 end of clone MtBC42C09 of cDNA library MtBC from arbuscular mycorrhiza of cultivar Jemalong of Medicago truncatula (barrel medic).
AL387404.1:388-415
GGATCTCCTAGTATCAGGGGTAAAACCTGG388TGACGTCTGTTCACAAGTTGGTTTATGTTCTATCCGCGGGGATCAATCTAATAGTGCT
N100408e rootphos(-) Medicago truncatula cDNA clone MHRP-5E6, mRNA sequence.
AW126301.2:371-398
GGATCTCCTAGTATCAGGGGTAAAACCTGG371TGACGTCTGTTCACAAGTTGGTTTATGTTCTATCCGCGGGGATCAATCTAATAGTGCT
EST315497 DSIR Medicago truncatula cDNA clone pDSIR-27K9, mRNA sequence.
AW560449.1:113-140
GGATCTCCTAGTATCAGGGGTAAAACCTGG113TGACGTCTGTTCACAAGTTGGTTTATGTTCTATCCGCGGGGATCAATCTAATAGTGCT
NF008A10RT1F1072 Developing root Medicago truncatula cDNA clone NF008A10RT 5', mRNA sequence.
AW687292.2:279-306
GGATCTCCTAGTATCAGGGGTAAAACCTGG279TGACGTCTGTTCACAAGTTGGTTTATGTTCTATCCGCGGGGATCAATCTAATAGTGCT
EST335242 DSIL Medicago truncatula cDNA clone pDSIL-6F13, mRNA sequence.
AW776177.1:166-193
GGATCTCCTAGTATCAGGGGTAAAACCTGG166TGACGTCTGTTCACAAGTTGGTTTATGTTCTATCCGCGGGGATCAATCTAATAGTGCT
EST335601 DSIL Medicago truncatula cDNA clone pDSIL-8M21, mRNA sequence.
AW776536.1:61-88
GGATCTCCTAGTATCAGGGGTAAAACCTGG61TGACGTCTGTTCACAAGTTGGTTTATGTTCTATCCGCGGGGATCAATCTACTAGTGCT
EST392924 KV1 Medicago truncatula cDNA clone pKV1-13A1, mRNA sequence.
BE202515.1:166-193
GGATCTCCTAGTATCAGGGGTAAAACCTGG166TGACGTCTGTTCACAAGTTGGTTTATGTTCTATCCGCGGGGATCAATCTAATAGTGCT
EST398124 KV0 Medicago truncatula cDNA clone pKV0-21L21, mRNA sequence.
BE205448.1:164-191
GGATCTCCTAGTATCAGGGGTAAAACCTGG164TGACGTCTGTTCACAAGTTGGTTTATGTTCTATCCGCGGGGATCAATCTAATAGTGCT
EST434084 DSLC Medicago truncatula cDNA clone pDSLC-37P10, mRNA sequence.
BF005586.1:374-401
GGATCTCCTAGTATCAGGGGTAAAACCTGG374TGACGTCTGTTCACAAGTTGGTTTATGTTCTATCCGCGGGGATCAATCTAATAGTGCT
NF020H08EC1F1075 Elicited cell culture Medicago truncatula cDNA clone NF020H08EC 5', mRNA sequence.
BF645435.1:317-344
GGATCTCCTAGTATCAGGGGTAAAACCTGG317TGACGTCTGTTCACAAGTTGGTTTATGTTCTATCCGCGGGGATCAATCTAATAGTGCT
NF080D04LF1F1031 Developing leaf Medicago truncatula cDNA clone NF080D04LF 5', mRNA sequence.
BG452429.1:358-385
GGATCTCCTAGTATCAGGGGTAAAACCTGG358TGACGTCTGTTCACAAGTTGGTTTATGTTCTATCCGCGGGGATCAATCTAATAGTGCT
EST489185 MHAM Medicago truncatula/Glomus versiforme mixed EST library cDNA clone pMHAM-48L22 5' end, mRNA sequence.
BG587413.1:381-408
GGATCTCCTAGTATCAGGGGTAAAACCTGG381TGACGTCTGTTCACAAGTTGGTTTATGTTCTATCCGCGGGGATCAATCTAATAGTGCT
EST509489 HOGA Medicago truncatula cDNA clone pHOGA-18K9 5' end, mRNA sequence.
BG647870.1:166-193
GGATCTCCTAGTATCAGGGGTAAAACCTGG166TGACGTCTGTTCACAAGTTGGTTTATGTTCTATCCGCGGGGATCAATCTAATAGTGCT
NF057D09FL1F1078 Developing flower Medicago truncatula cDNA clone NF057D09FL 5', mRNA sequence.
BI271326.1:342-369
GGATCTCCTAGTATCAGGGGTAAAACCTGG342TGACGTCTGTTCACAAGTTGGTTTATGTTCTATCCGCGGGGATCAATCTAATAGTGCT
EST593071 BNIR Medicago truncatula/Meloidogyne incognita mixed EST library cDNA clone pBNIR-24G20, mRNA sequence.
BM814977.1:95-122
GGATCTCCTAGTATCAGGGGTAAAACCTGG95TGACGTCTGTTCACAAGTTGGTTTATGTTCTATCCGCGGGGATCAATCTAATAGTGCT
EST607735 GLSD Medicago truncatula cDNA clone pGLSD-28K3, mRNA sequence.
BQ122159.1:166-193
GGATCTCCTAGTATCAGGGGTAAAACCTGG166TGACGTCTGTTCACAAGTTGGTTTATGTTCTATCCGCGGGGATCAATCTAATAGTGCT
EST607806 GLSD Medicago truncatula cDNA clone pGLSD-28G20, mRNA sequence.
BQ122230.1:166-193
GGATCTCCTAGTATCAGGGGTAAAACCTGG166TGACGTCTGTTCACAAGTTGGTTTATGTTCTATCCGCGGGGATCAATCTAATAGTGCT
NF043G02IR1F1019 Irradiated Medicago truncatula cDNA clone NF043G02IR 5', mRNA sequence.
BQ153716.1:40-67
GGATCTCCTAGTATCAGGGGTAAAACCTGG40TGACGTCTGTTCACAAGTTGGTTTATGTTCTATCCGCGGGGATCAATCTAATAGTGCT
NF069C09IR1F1070 Irradiated Medicago truncatula cDNA clone NF069C09IR 5', mRNA sequence.
BQ154404.1:286-313
GGATCTCCTAGTATCAGGGGTAAAACCTGG286TGACGTCTGTTCACAAGTTGGTTTATGTTCTATCCGCGGGGATCAATCTAATAGTGCT
NF081E03IR1F1023 Irradiated Medicago truncatula cDNA clone NF081E03IR 5', mRNA sequence.
BQ155530.1:40-67
GGATCTCCTAGTATCAGGGGTAAAACCTGG40TGACGTCTGTTCACAAGTTGGTTTATGTTCTATCCGCGGGGATCAATCTAATAGTGCN
NF089A07IR1F1053 Irradiated Medicago truncatula cDNA clone NF089A07IR 5', mRNA sequence.
BQ156097.1:40-67
GGATCTCCTAGTATCAGGGGTAAAACCTGG40TGACGTCTGTTCACAAGTTGGTTTATGTTCTATCCGCGGGGATCAATCTAATAGTGCT
NF103C08IR1F1066 Irradiated Medicago truncatula cDNA clone NF103C08IR 5', mRNA sequence.
BQ157296.1:342-369
GGATCTCCTAGTATCAGGGGTAAAACCTGG342TGACGTCTGTTCACAAGTTGGTTTATGTTCTATCCGCGGGGATCAATCTAATAGTGCT
EST635118 GLSD Medicago truncatula cDNA clone pGLSD-26E10, mRNA sequence.
CA857863.1:149-176
GGATCTCCTAGTATCAGGGGTAAAACCTGG149TGACGTCTGTTCACAAGTTGGTTTATGTTCTATCCGCGGGGATCAATCTAATAGTGCT
EST646748 HOGA Medicago truncatula cDNA clone HOGA-29H9, mRNA sequence.
CB893956.1:577-604
GGATCTCCTAGTATCAGGGGTAAAACCTGG577TGACGTCTGTTCACAAGTTGGTTTATGTTCTATCCGCGGGGATCAATCTAATAGTGCT
s13dNF55E03VI019_448782 Virus-Infected Leaves Medicago truncatula cDNA, mRNA sequence.
CX520498.1:25-52
GGCACGAGGAGGGGTAAAACCTGG25TGACGTCTGTTCACAAGTTGGTTTATGTTCTATCCGCGGGGATCAATCTAATAGTGCT
s13dNF82C03MJ018_257628 Methyl Jasmonate-Elicited Root Cell Suspension Culture Medicago truncatula cDNA, mRNA sequence.
CX531843.1:20-47
GCACGAGGGTAAAACCTGG20TGACGTCTGTTCACAAGTTGGTTTATGTTCTATCCGCGGGGATCAATCTAATAGTGCT
s13dNF62D06MJ046_270308 Methyl Jasmonate-Elicited Root Cell Suspension Culture Medicago truncatula cDNA, mRNA sequence.
CX532000.1:20-47
GCACGAGGGTAAAACCTGG20TGACGTCTGTTCACAAGTTGGTTTATGTTCTATCCGCGGGGATCAATCTAATAGTGCT
Medicago truncatula strain A17 clone mth2-54a15, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces.
AC166315.5:92599-92626
GTTTGATCTTGATCTGCAGGTAAAACCTGG92599TGACGTCTGTTCACAAGTTGGTTTATGTTCTATCCGCGGGGATCAATCTAATAGGTCA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ACATAAACCAACTTGTGAACAGACGTCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ACATAAACCAACTTGTGAACAGACGTCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.090 | 0.082 | search_plus_done; http://172.18.8.135:50400/match?q=ACATAAACCAACTTGTGAACAGACGTCA&k=0&no_gap=0&offset=0&limit=50
0.621 | 0.531 | search_minus_done; http://172.18.8.135:50400/match?q=TGACGTCTGTTCACAAGTTGGTTTATGT&k=0&no_gap=0&offset=0&limit=49
0.640 | 0.019 | cgi_end;

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