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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:32:03, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Gobius niger genome assembly, chromosome: 9.
OX637603.1:15154674-15154693
TATTGTATACCAGCTCTATGTTTTATTAAG15154674ACATATCCACCACCACCAACCACCGGGAGAAAAAAGATCTGGAACAAATG
PP_LEc0007P08f Peach shoot Prunus persica cDNA clone PP_LEc0007P08f, mRNA sequence.
DW342058.1:519-538
CCTCAGCGACAGCGATGATGAAGACCCAAC519ACATATCCACCACCACCAACAAGCCAAGCAAT
CAXP9476.fwd CAXP Lottia gigantea from head, foot, radula and heart Lottia gigantea cDNA clone CAXP9476 5', mRNA sequence.
FC595834.1:209-228
ACTTTCTCAGGTCCTATAGAAAAATTATTG209ACATATCCACCACCACCAACTAAATTTGCATTAACTATAACAAATGAAGA
CBBN10852.fwd CBBN Lottia gigantea 3,4,5,6.5d Larvae (M) Lottia gigantea cDNA clone CBBN10852 5', mRNA sequence.
FC758607.1:460-479
ACTTTCTCAGGTCCTATAGAAAAATTATTG460ACATATCCACCACCACCAACTAAATTTGCATTAACTATAACAAATGAAGA
Pm_2749 Fruits and flowers of Prunus mume cv. Xiyeqing Prunus mume cDNA, mRNA sequence.
GW871323.1:145-164
CCTCAGCGACAGCGATGATGAAGACCCAAC145ACATATCCACCACCACCAACGAGCCAAGCAATCTCGAGCTCAAGATGAAT
Papaver somniferum cultivar Roxanne chromosome 11.
CP048212.1:10361467-10361486
CACCACCATTCCACAAAAACTGGTACCCTC10361467ACATATCCACCACCACCAACATTCACTACCATTCCACCACCAACGTTCAA
Papaver somniferum cultivar Roxanne chromosome 3.
CP048215.1:291696654-291696673
CACCACCATTCCACCACTACTAGCACCACC291696654ACATATCCACCACCACCAACATTCAACTAACATTACACCACCACCACTCC
Euphorbia peplus chromosome 7.
CP110843.1:17722594-17722613
AGAATATAACAGTTACATGGATGAAAACTT17722594ACATATCCACCACCACCAACAACAACATCCCGAACACTTTCTTTGATGGT
Khaya senegalensis isolate HCNGB_00002341 chromosome 23.
CP135546.1:7159713-7159732
CAACACCACAAAAGAGAATCAAAGAAACTT7159713ACATATCCACCACCACCAACAAAAACATCCCGGACACTTTCTCTGATAGT
Prunus mume strain taoxingmei clone P25 SSR marker genomic sequence.
GU458026.1:1-20
1ACATATCCACCACCACCAACTTACATGCATCCTCAGGGGTGCCTTATCAG
Prunus mume strain momei clone P26 SSR marker genomic sequence.
GU458027.1:1-20
1ACATATCCACCACCACCAACTTACATGCATCCTCATGGGTGCCTTATCAG
Secale cereale genome assembly, chromosome: 5R.
LR738713.1:141338506-141338525
ACCCTAGACACCTCTTCCGCTATACCCTGG141338506ACATATCCACCACCACCAACATTTCCTAACCAACATCACTACGGTCTTAC
Secale cereale genome assembly, chromosome: 5R.
LR738713.1:160412819-160412838
ACCCTAGACACCTCTTCCGCTATACCCTGG160412819ACATATCCACCACCACCAACATTTCCTAACCAACATCACTACGGTCTGAC
Secale cereale genome assembly, chromosome: 7R.
LR738715.1:497998876-497998895
ACCCTCGACACCCCTTCAGCTATACACTCG497998876ACATATCCACCACCACCAACATTTCCTAACCAACATCACTACGGTCTTAC
Digitaria exilis genome assembly, chromosome: 2A.
LR994606.1:16918270-16918289
CGCCCCTCCCAGGCGAAGAACTCCCATTCT16918270ACATATCCACCACCACCAACATTGCTAGCACGGTCATCTTAGTTGAGCGG
Ailanthus altissima genome assembly, chromosome: 16.
OX327698.1:28690594-28690613
CAATATTACATTATAAAATTAAAGAAACTT28690594ACATATCCACCACCACCAACAAAAACATCCCGGACGCTTTCTCCGATGGT
Solanum dulcamara genome assembly, chromosome: 10.
OX359261.1:3311125-3311144
GAACCATATCCTTGACTAAGCCTCTGCCTC3311125ACATATCCACCACCACCAACAGGTGTTCCACCAGACATATTAACAAAATT
Euphorbia lathyris genome assembly, chromosome: 3.
OY755222.1:51765979-51765998
AGAATCTAACAGTTAGATGGAAGAAAACTT51765979ACATATCCACCACCACCAACAACAACATCCCGAACACTTTCTTTGATGGT
Vaccinium vitis-idaea genome assembly, chromosome: 3.
OY978217.1:43551605-43551624
CGCGCGCGCCCCTGCCACTCTTCCCAAATC43551605ACATATCCACCACCACCAACTCTATCTCTCTCTCTCTCTCCCCCGACTAC
Triticum timopheevii genome assembly, chromosome: 3G.
OY997266.1:268966954-268966973
ACAACAACAACAACAGCAATAGCAACAACA268966954ACATATCCACCACCACCAACAACAGCAACAACAGCAACAGCAACAACAGC
Mya arenaria isolate MELC-2E11 chromosome 17.
CP111028.1:26874629-26874648
TCCCCCAATCCGGGACGCCGGCCGTCCTCA26874629ACATATCCACCACCACCAACGTGGACGCCCCTGGCCTCTACGTGTTCCGA
Cryptosula pallasiana genome assembly, chromosome: 9.
OX183138.1:11459499-11459518
CGTCCTAGGACAGCACGTGCAAAGAAAAGG11459499ACATATCCACCACCACCAACGACATATCCAACAACAGTGAGACCATACCC
Amphimallon solstitiale genome assembly, chromosome: 9.
OY720683.1:70523949-70523968
GTAGTTGTGAATAATTACTCAAACTTCATG70523949ACATATCCACCACCACCAACGCAAAATTTAATTTTCGAAGATTGATTACC
Cepaea hortensis genome assembly, chromosome: 1.
OY992876.1:450088137-450088156
CCCACCCACACACGCATCCTCTACCCACCA450088137ACATATCCACCACCACCAACCCACACACGCCAACCACCCAGCCAAACACG
Volucella zonaria genome assembly, chromosome: 5.
OZ014534.1:81686098-81686117
CCCATTAGACTCATACCAGCCCATAACATC81686098ACATATCCACCACCACCAACACGACGTCGAACATAAGTTTTGCCATCAGA
JP 2009538603-A/157: Modified Microbial Nucleic Acid.
FV536178.1:2973512-2973531
ATGTTGGATTTTTTGAGAGATTGTTGGTTA2973512GTTGGTGGTGGTGGATATGTTATGTGATGTTTTGGTTGATGTGGTTTGGT
JP 2009538603-A/158: Modified Microbial Nucleic Acid.
FV536179.1:2973512-2973531
ATGTTGGATTTTTTGAGAGATTGTTGGTTA2973512GTTGGTGGTGGTGGATATGTTATGTGATGTTTTGGTTGATGTGGTTTGGT
JP 2009538603-A/181: Modified Microbial Nucleic Acid.
FV536202.1:866890-866909
GGTGGTGTTGTTGTTGTTGTGGTAATTGTT866890GTTGGTGGTGGTGGATATGTTTTTGGAATATGATATTGAAGGTTGTGATG
JP 2009538603-A/182: Modified Microbial Nucleic Acid.
FV536203.1:866890-866909
GGTGGTGTTGTTGTTGTTGTGGTAATTGTT866890GTTGGTGGTGGTGGATATGTTTTTGGAATATGATATTGAAGGTTGTGATG
KN6B.109A24F.060106T7 KN6B Nicotiana tabacum cDNA clone KN6B.109A24, mRNA sequence.
EB441393.1:748-767
TTTTGTGTTAATATGTTTGGTGGAACACCA748GTTGGTGGTGGTGGATATGTGAGGCAGCGGCTAAGTCAAGGGTATGGTTC
TT-20_B01 K326 early senescent leaf library Nicotiana tabacum cDNA, mRNA sequence.
FG642552.1:610-629
TTTTGTATTAATATGTCTGGTGGAACACCA610GTTGGTGGTGGTGGATATGTGAGGCNNNGGCTAAGTCAAGGGTATGGTTC
Prunus dulcis DNA, unplaced-scaffold_1493.
AP021830.1:47342-47361
ATTCATCTTGAGCTCGAGATTGCTTGGCTT47342GTTGGTGGTGGTGGATATGTGTTGGGTCTTCATCATCGCTGTCGCTGAGG
Papaver somniferum cultivar Roxanne chromosome 3.
CP048215.1:64835527-64835546
GCGGTGGTGGTTGTGGAATGGTAGTTGAAT64835527GTTGGTGGTGGTGGATATGTGGTGGTACTAATGGTGGTGGAATGATGGTG
Papaver somniferum cultivar Roxanne chromosome 7.
CP048219.1:27803733-27803752
TGTTGAGCGGTGGTGGAATGGTAGTTGAAT27803733GTTGGTGGTGGTGGATATGTGGTGGTGCTAATGGTTGTGGCGGCGTCCAT
Swietenia macrophylla isolate HCNGB_00002344 chromosome 13.
CP135563.1:269099-269118
ACTATCCGAGAAAGTGTCCGGGACGTTTTT269099GTTGGTGGTGGTGGATATGTAAGTTTCTTTGATTCTCTTTTGTGGTGTTG
Avena insularis genome assembly, chromosome: 6C.
OU342343.1:98166486-98166505
AGCAAATCCTTCTTTGCTGTACCCTCTGGC98166486GTTGGTGGTGGTGGATATGTAGGAATAAAATCAATGCTGAGGGACGGAAC
Avena sativa genome assembly, chromosome: 13.
OV702291.1:103391375-103391394
AGCAAATCCTTCTTTGCTGTACCCTCTGGC103391375GTTGGTGGTGGTGGATATGTAGGAATAAAATCAATGCTGAGGGACGGAAC
Euonymus europaeus genome assembly, chromosome: 14.
OY756970.1:17064012-17064031
TCCATTAGAGAAAGTGTCCGGGATGTTTTT17064012GTTGGTGGTGGTGGATATGTAAGCCATATTTGTAAAACTAATGTTGTGTT
Viola odorata genome assembly, chromosome: 2.
OY829538.1:760620-760639
ACCATCAAAGAAAGTGTTCGGGATGTAGTT760620GTTGGTGGTGGTGGATATGTAAGTTTTACTCCATTCTGTTAATGACTGAA
Viola odorata genome assembly, chromosome: 8.
OY829544.1:275202-275221
ACCATCAAAGAAAGTGTTCGGGATGTTGTT275202GTTGGTGGTGGTGGATATGTAAGTTCTACTCCATTCAGTTAATTACTGTG
Sarcophaga variegata genome assembly, chromosome: 2.
OW026359.1:46980790-46980809
AGCAGCATTGAATTCGAACAAACCATAGGT46980790GTTGGTGGTGGTGGATATGTCCAGTGGTGGACAGCGGGAGATGCAGAGAA
Sarcophaga variegata genome assembly, chromosome: 5.
OW026362.1:65718659-65718678
AGCAGCATTGAATTCGAACAAACCATAGGT65718659GTTGGTGGTGGTGGATATGTCCAGTGGTGGACAGCGGGAGATGCAGAGAA
Heterobilharzia americana genome assembly, chromosome: Z.
OX104110.1:56167144-56167163
GTGTTAATATTTGTTGTTGTTGTTGTTGTT56167144GTTGGTGGTGGTGGATATGTCCCGGTTGCAGCTAGCATAGAACATATTGC
Harmothoe impar genome assembly, chromosome: 15.
OX381718.1:44499872-44499891
AATGTGACGGGTCGGGCTGTGAATGTTGTT44499872GTTGGTGGTGGTGGATATGTTGTTGTTGTTGTTGCTGTTGTTGTTGGGAG
Cerastoderma edule genome assembly, chromosome: 4.
OX401407.1:50925319-50925338
TCAGGGACGGCATGGTAACGCCTTGTTGTT50925319GTTGGTGGTGGTGGATATGTTGCTGTTGTTGATGCTGTCAGTCTTGGCTG
Hydrotaea cyrtoneurina genome assembly, chromosome: 2.
OY282513.1:93414815-93414834
CAGCCTTATGGTGTTGGCGATTGAAGCGTT93414815GTTGGTGGTGGTGGATATGTTGAGTGGTGACTATGGCGATGATTGTATTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACATATCCACCACCACCAAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACATATCCACCACCACCAAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.443 | 0.434 | search_plus_done; http://172.18.8.135:50400/match?q=ACATATCCACCACCACCAAC&k=0&no_gap=0&offset=0&limit=50
0.719 | 0.276 | search_minus_done; http://172.18.8.135:50400/match?q=GTTGGTGGTGGTGGATATGT&k=0&no_gap=0&offset=0&limit=25
0.733 | 0.014 | cgi_end;

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