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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 11:22:55, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Oryzias latipes strain Hd-rR chromosome 11 sequence.
CP020675.1:18607694-18607715
TTTCATCGTCTTCTCAACACAATACTGTCT18607694ACATCAAATTGTTGCATTATACGGTTCATGTCCAAAGTTCAGTACATATTAA
Capsicum annuum Takanotsume DNA, chromosome 6, sequence.
AP026701.1:4856984-4857005
CTTATACAACAAAAAAATACCACAAATTAT4856984ACATCAAATTGTTGCATTATACTCTATAAATAAATAAAAAGTAGCAGAAATT
Hordeum bulbosum genome assembly, chromosome: 1H_2.
OY737873.1:397734192-397734213
GTCGTTTTGTTGCGGATATGTTATACTAAG397734192ACATCAAATTGTTGCATTATACTCCCTCTGTAAACTAATATAAGAGTGTTTA
Dolichopus griseipennis genome assembly, chromosome: 4.
OY720444.1:7034078-7034099
TTTTTACTTGTGATAATTTGAAAGATAAAC7034078ACATCAAATTGTTGCATTATACCCGTTAAAGTTTATTTCTGGGATTTTCATA
Oryzias latipes strain HSOK chromosome 11.
CP020631.1:11154173-11154194
TTAATATATACTGAACTTTGGACATAAACC11154173GTATAATGCAACAATTTGATGTAGACAGTATTGTGTTGAGAACAAGATGAAA
Oryzias latipes Fosmid clone:GOLWFno719_l08, reverse end.
DH346791.1:282-303
TTAATATGTACTGAACTTTGGACATGAACC282GTATAATGCAACAATTTGATGTAGACAGTATTGTGTTGAGAAGACGATGAAA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 6.
CP124726.1:250233344-250233365
AATTTCTGCTACTTTTTATTTATTTATAGA250233344GTATAATGCAACAATTTGATGTATAATTTGTGGTATTTTTTTGTTGTATAAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACATCAAATTGTTGCATTATAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACATCAAATTGTTGCATTATAC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.157 | 0.148 | search_plus_done; http://172.18.8.135:50400/match?q=ACATCAAATTGTTGCATTATAC&k=0&no_gap=0&offset=0&limit=50
0.259 | 0.102 | search_minus_done; http://172.18.8.135:50400/match?q=GTATAATGCAACAATTTGATGT&k=0&no_gap=0&offset=0&limit=46
0.261 | 0.002 | cgi_end;

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