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2025-04-11 22:10:41, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Trifolium pratense cDNA clone:RCC06154.
BB933647.1:241-260
GCTGCTTACAACTTGGGAACTGGTTGTGGT241ACATCGGTGCTTGAAATGGTTGATGCATTTGAGAAAGCTTCTGGCAAGAA
Trifolium pratense cDNA clone:RCC07396.
BB934711.1:322-341
GCTGCTTACAACTTGGGAACTGGTTGTGGT322ACATCGGTGCTTGAAATGGTTGATGCATTTGAGAAAGCTTCTGGCAAGAA
Trifolium pratense cDNA clone:RCC08961.
BB936077.1:241-260
GCTGCTTACAACTTGGGAACTGGTTGTGGT241ACATCGGTGCTTGAAATGGTTGATGCATTTGAGAAAGCTTCTGGCAAGAA
Mdfw2036k05.y1 Mdfw Malus domestica cDNA clone Mdfw2036k05 5' similar to TR:O65780 O65780 UDP-GALACTOSE 4-EPIMERASE, mRNA sequence.
CN579639.1:32-51
GCTGCCTACAATCTGGGAACCGGACAAGGT32ACATCGGTGCTTGAAATGGTTGCTGGCTTCGAGAAGGCTTCTGGCAAGAA
010131AARA005566HT (AARA) Royal Gala partially senescing leaf Malus domestica cDNA clone AARA005566, mRNA sequence.
CN875174.1:62-81
GCTGCCTACAATCTGGGAACCGGACAACGT62ACATCGGTGCTTGAAATGGTTGCTGGCTTCGAGAAGGCTTCTGGCAAGAA
Mdfr3008a20.y3 Mdfr Malus domestica cDNA clone Mdfr3008a20 5' similar to TR:O65780 O65780 UDP-GALACTOSE 4-EPIMERASE, mRNA sequence.
CO416619.1:261-280
GCTGCCTACAATCTGGGAACCGGACAAGGT261ACATCGGTGCTTGAAATGGTTGCTGGCTTCGAGAAGGCTTCTGGCAAGAA
Mdfrt3043m11.y1 Mdfrt Malus domestica cDNA clone Mdfrt3043m11 5' similar to TR:O65780 O65780 UDP-GALACTOSE 4-EPIMERASE, mRNA sequence.
CO576145.1:316-335
TGTGCCTACAATCTGGGAACCGGACAAGGT316ACATCGGTGCTTGAAATGGTTGCTGGCTTCGAGAAGGCTTCTGGCAAGAA
RTS_114_G08 Phaseolus vulgaris P- root EST library Phaseolus vulgaris cDNA 5', mRNA sequence.
CV542042.1:169-188
ACTGCCTATAATTTGGGAACTGGGCGTGGT169ACATCGGTGCTTGAAATGGTCGCTGCATTTGAAAAAGCTTCCGGCAAGAA
RTS_118_A04 Phaseolus vulgaris P- root EST library Phaseolus vulgaris cDNA 5', mRNA sequence.
CV542261.1:216-235
ACTGCCTATAATTTGGGAACTGGGCGTGGT216ACATCGGTGCTTGAAATGGTCGCTGCATTTGAAAAAGCTTCCGGCAAGAA
RTS_135_C10 Phaseolus vulgaris P- root EST library Phaseolus vulgaris cDNA 5', mRNA sequence.
CV543451.1:367-386
ACTGCCTATAATTTGGGAACTGGGCGTGGT367ACATCGGTGCTTGAAATGGTCGCTGCATTTGAAAAAGCTTCCGGCAAGAA
Mdrtp1009K07.g1 Apple_EST_Mdrtp Malus domestica x Malus sieversii cDNA similar to sp|Q43070|GAE1_PEA UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) pir|T06526 UDPglucose 4-epim
DT040656.1:644-663
GCTGCCTACAATCTGGGAACCGGACAAGGT644ACATCGGTGCTTGAAATGGTTGCTGGCTTCGAGAAGGCTTCTGGCAAGAA
Pv039B_M13R_C03.ab1 Phaseolus vulgaris cv Early gallatin Phaseolus vulgaris cDNA, mRNA sequence.
FE690562.1:397-416
ACTGCCTATAATTTGGGAACTGGGCGTGGT397ACATCGGTGCTTGAAATGGTCGCTGCATTTGAAAAAGCTTCCGGCAAGAA
Pv036C_M13R_H08.ab1 Phaseolus vulgaris cv Early gallatin Phaseolus vulgaris cDNA, mRNA sequence.
FE690564.1:393-412
ACTGCCTATAATTTGGGAACTGGGCGTGGT393ACATCGGTGCTTGAAATGGTCGCTGCATTTGAAAAAGCTTCCGGCAAGAA
Pv039B_M13F_C03.ab1 Phaseolus vulgaris cv Early gallatin Phaseolus vulgaris cDNA, mRNA sequence.
FE690567.1:587-606
ACTGCCTATAATTTGGGAACTGGGCGTGGT587ACATCGGTGCTTGAAATGGTCGCTGCATTTGAAAAAGCTTCCGGCAAGAA
Md0416 Venturia inaequalis challenged cDNA suppression subtractive hybridization library Malus domestica cDNA similar to uridine diphosphate glucose epimerase, mRNA sequence.
FE969496.1:1-20
1ACATCGGTGCTTGAAATGGTTGCTGGCTTCGAGAAGGCTTCTGGCAAGAA
MOPFY13TF MOP Vigna unguiculata cDNA 5', mRNA sequence.
FF555938.1:226-245
ACTGCCTATAATTTGGGAACTGGGCGTGGC226ACATCGGTGCTTGAAATGGTTGCTGCATTTGAAAAAGCTTCCGGCAAGAA
fl_04G04_BH2 Md_fruit-leaf_subtractive_cDNA_library Malus domestica cDNA, mRNA sequence.
GD254946.1:1-20
1ACATCGGTGCTTGAAATGGTTGCTGGCTTCGAGAAGGCTTCTGGCAAGAA
vsu-ars_006736_LI10Contig_22469 VSU-ARS-L10 Phaseolus acutifolius cDNA, mRNA sequence.
HO781703.1:1051-1070
ACTGCCTATAATTTGGGAACTGGGCGTGGT1051ACATCGGTGCTTGAAATGGTCGCTGCATTTGAAAAAGCTTCCGGCAAGAA
Pyrus pyrifolia mRNA, clone: NFR6_21_62, 5' end sequence, expressed in fruit.
HX760481.1:438-457
GCTGCCTACAATCTCGGAACTGGACAAGGT438ACATCGGTGCTTGAAATGGTTGCTGGTTTCGAGAAAGCCTCTGGCAAGAA
Vigna angularis mRNA, clone: VES12_A07.
HX946618.1:818-837
ACTGCCTATAATTTGGGAACTGGGCGTGGT818ACATCGGTGCTTGAAATGGTCGCTGCATTTG
UNQ11-L17.x1d-t UNQ (Panicum virgatum cv. Alamo-AP13) Panicum virgatum cDNA 5', mRNA sequence.
JG926211.1:530-549
AGACGATCACCAAAAGTGCTGTCATTGAAA530ACATCGGTGCTTGAAATGGTATATTTTTAATATTTCTGGGCCTTATATTG
TSA: Pyrus pyrifolia mRNA, contig: contig_9159.
FX395039.1:883-902
GCTGCCTACAATCTCGGAACTGGACAAGGT883ACATCGGTGCTTGAAATGGTTGCTGGTTTCGAGAAAGCTTCTGGCAAGAA
TSA: Pyrus communis mRNA, contig: lc10625.
FX619209.1:246-265
GCTGCCTACAATCTCGGAACTGGACAAGGT246ACATCGGTGCTTGAAATGGTTGCTGGTTTCGAGAAAGCTTCTGGCAAGAA
TSA: Pyrus communis mRNA, contig: lc41657.
FX648806.1:51-70
CACGGTTACAATCTCGGAACTGGACAAGGT51ACATCGGTGCTTGAAATGGTTGCTGGTTTCGAGAAAGCTTCTGGCAAGAA
TSA: Pyrus communis mRNA, contig: lc49554.
FX655718.1:221-240
GCTGCCTACAATCTCGGAACTGGACAAGGT221ACATCGGTGCTTGAAATGGTTGCTGGTTTCGAGAAAGCTTCTGGCAAGAA
TSA: Pyrus x bretschneideri Unigene5540_XinShao mRNA sequence.
JR600794.1:1121-1140
GCTGCCTACAATCTCGGAACTGGACAAGGT1121ACATCGGTGCTTGAAATGGTTGCTGGTTTCGAGAAAGCTTCTGGCAAGAA
TSA: Pyrus x bretschneideri Unigene5541_XinShao mRNA sequence.
JR600795.1:1369-1388
GCTGCCTACAATCTCGGAACTGGACAAGGT1369ACATCGGTGCTTGAAATGGTTGCTGGTTTCGAGAAAGCTTCTGGCAAGAA
TSA: Pyrus x bretschneideri Unigene6668_XinShao mRNA sequence.
JR601863.1:904-923
GCTGCCTACAATCTCGGAACTGGACAAGGT904ACATCGGTGCTTGAAATGGTTGCTGGTTTCGAGAAAGCTTCTGGCAAGAA
TSA: Pyrus x bretschneideri Unigene13814_XinShao mRNA sequence.
JR608745.1:1152-1171
GCTGCCTACAATCTCGGAACTGGACAAGGT1152ACATCGGTGCTTGAAATGGTTGCTGGTTTCGAGAAAGCTTCTGGCAAGAA
BAT93 Pv-1616 Phaseolus vulgaris BAT93 young leaves genomic DNA Phaseolus vulgaris genomic, genomic survey sequence.
DX823126.1:300-319
ACTGCCTATAATTTGGGAACTGGGCGTGGT300ACATCGGTGCTTGAAATGGTCGCTGCATTTGAAAAAGCTTCCGGCAAGGT
Jalo EEP 558 Pv-1616 Phaseolus vulgaris Jalo EEP 558 young leaves genomic DNA Phaseolus vulgaris genomic, genomic survey sequence.
DX823648.1:298-317
ACTGCCTATAATTTGGGAACTGGGCGTGGT298ACATCGGTGCTTGAAATGGTCGCTGCATTTGAAAAAGCTTCCGGCAAGGT
Vigna unguiculata subsp. unguiculata cultivar IT97K-499-35 clone BAC H093B10, *** SEQUENCING IN PROGRESS ***, 29 unordered pieces.
AC273527.1:112955-112974
ACTGCCTATAATTTGGGAACTGGGCGTGGC112955ACATCGGTGCTTGAAATGGTTGCTGCATTTGAAAAAGCTTCCGGCAAGGT
Malus x domestica UGE mRNA for UDP-galactose, complete cds.
AB272752.1:918-937
GCTGCCTACAATCTGGGAACCGGACAAGGT918ACATCGGTGCTTGAAATGGTTGCTGGCTTCGAGAAGGCTTCTGGCAAGAA
Vigna unguiculata cultivar Xiabao 2 chromosome Vu03.
CP039346.1:1696174-1696193
ACTGCCTATAATTTGGGAACTGGGCGTGGC1696174ACATCGGTGCTTGAAATGGTTGCTGCATTTGAAAAAGCTTCCGGCAAGGT
Antiaris toxicaria isolate JCLG002 chromosome 11.
CP141163.1:18477343-18477362
ACTGCTTACAACTTGGGTACTGGACATGGA18477343ACATCGGTGCTTGAAATGGTTGCTGCATTCGAAAAAGCGTCTGGCAAGGT
Antiaris toxicaria isolate JCLG002 chromosome 11.
CP141176.1:18393546-18393565
ACTGCTTACAACTTGGGTACTGGACATGGA18393546ACATCGGTGCTTGAAATGGTTGCTGCATTCGAAAAAGCGTCTGGCAAGGT
Malus hybrid cultivar cultivar Flame chromosome 4.
CP141930.1:8289335-8289354
GCTGCCTACAATCTGGGAACCGGACAAGGT8289335ACATCGGTGCTTGAAATGGTTGCTGGCTTCGAGAAGGCTTCTGGCAAGGT
Malus hybrid cultivar cultivar SH6 chromosome 4.
CP143361.1:7972563-7972582
GCTGCCTACAATCTGGGAACCGGACAAGGT7972563ACATCGGTGCTTGAAATGGTTGCTGGCTTCGAGAAGGCTTCTGGCAAGGT
Malus hybrid cultivar cultivar SH6 chromosome 4.
CP143378.1:7403262-7403281
GCTGCCTACAATCTGGGAACCGGACAAGGT7403262ACATCGGTGCTTGAAATGGTTGCTGGCTTCGAGAAAGCTTCTGGCAAGGT
Ficus carica clone UFFc8 microsatellite sequence.
HM149507.1:10-29
GGACAAGGA10ACATCGGTGCTTGAAATGGTTTCTGCATTCGAAAAAGCGTCTGGCAAGGT
Malus sylvestris genome assembly, chromosome: 4.
OU696506.1:8243976-8243995
GCTGCCTACAATCTGGGAACCGGACAAGGT8243976ACATCGGTGCTTGAAATGGTTGCTGGCTTCGAGAAGGCTTCTGGCAAGGT
Malus domestica genome assembly, chromosome: 4.
OU696680.1:8134273-8134292
GCTGCCTACAATCTGGGAACCGGACAAGGT8134273ACATCGGTGCTTGAAATGGTTGCTGGCTTCGAGAAGGCTTCTGGCAAGGT
Malus domestica genome assembly, chromosome: 4.
OU744545.1:8122468-8122487
GCTGCCTACAATCTGGGAACCGGACAAGGT8122468ACATCGGTGCTTGAAATGGTTGCTGGCTTCGAGAAGGCTTCTGGCAAGGT
Malus domestica genome assembly, chromosome: 4.
OU744956.1:8000733-8000752
GCTGCCTACAATCTGGGAACCGGACAAGGT8000733ACATCGGTGCTTGAAATGGTTGCTGGCTTCGAGAAGGCTTCTGGCAAGGT
Malus domestica genome assembly, chromosome: 4.
OU744994.1:8239040-8239059
GCTGCCTACAATCTGGGAACCGGACAAGGT8239040ACATCGGTGCTTGAAATGGTTGCTGGCTTCGAGAAGGCTTCTGGCAAGGT
Trifolium fragiferum genome assembly, chromosome: 2.
OX940790.1:4766363-4766382
GCTGCTTACAACTTGGGAACCGGTCGTGGT4766363ACATCGGTGCTTGAAATGGTTGATGCATTTGAGAAAGCTTCTGGCAAGGT
Sphenostylis stenocarpa genome assembly, chromosome: 3.
OY731400.1:83357100-83357119
ACTGCCTATAATTTGGGAACTGGGCGCGGT83357100ACATCGGTGCTTGAAATGGTAGCTGCATTTGAAAAAGCTTCCAGCAAGGT
Crataegus laevigata genome assembly, chromosome: 7.
OY756944.1:8477295-8477314
GCTGCCTACAATCTGGGAACCGGACAAGGT8477295ACATCGGTGCTTGAAATGGTTGCTGGCTTCGAGAAAGCTTCTGGCAAGGT
Pyrus communis genome assembly, chromosome: 17.
OY757084.1:5596736-5596755
GCTGTCTACAATCTCGGAACTGGACAAGGT5596736ACATCGGTGCTTGAAATGGTTTCTGGTTTCGAGAAAGCTTCTGGCAAGGT
Malus x domestica mRNA, clone: A10E, mature fruit skin, up-regulated gene by UV-B.
AB273183.1:516-535
TTCTTGCCAGAAGCCTTCTCGAAGCCAGCA516ACCATTTCAAGCACCGATGT
TSA: Ficus carica mRNA, contig: FICAF00456.
FX377430.1:328-347
TTCTTGCCAGACGCTTTTTCGAATGCAGAA328ACCATTTCAAGCACCGATGTACCTTGTCCAGTACCCAAGTTGTAAGCAGT
VUK063D12.F VUK Phaseolus vulgaris genomic 5', genomic survey sequence.
JY888031.1:473-492
ACCTTGCCGGAAGCTTTTTCAAATGCAGCG473ACCATTTCAAGCACCGATGTACCACGCCCAGTTCCCAAATTATAGGCAGT
Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
AP015034.1:65780490-65780509
ACCTTGCCGGAAGCTTTTTCAAATGCAGCG65780490ACCATTTCAAGCACCGATGTACCACGCCCAGTTCCCAAATTATAGGCAGT
Malus x robusta genome assembly, chromosome: 17.
OY720341.1:17960864-17960883
ACCTTGCCAGAAGCCTTCTCGAAGCCAGCA17960864ACCATTTCAAGCACCGATGTACCTTGTCCGGTTCCCAGATTGTAGGCAGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACATCGGTGCTTGAAATGGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACATCGGTGCTTGAAATGGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.405 | 1.397 | search_plus_done; http://172.18.8.135:50400/match?q=ACATCGGTGCTTGAAATGGT&k=0&no_gap=0&offset=0&limit=50
1.592 | 0.187 | search_minus_done; http://172.18.8.135:50400/match?q=ACCATTTCAAGCACCGATGT&k=0&no_gap=0&offset=0&limit=1
1.595 | 0.003 | cgi_end;

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