GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 07:51:40, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Capsicum annuum Takanotsume DNA, chromosome 3, sequence.
AP026698.1:3476019-3476038
ACACCTAGTACTTTTATTCAACAAAACAAG3476019ACATGATGACCATCCATCCAAAGTAACTGAATGTGGATTTATGATATATA
Capsicum annuum Takanotsume DNA, chromosome 3, sequence.
AP026698.1:3517202-3517221
ACTCGTAGTACTTTTATTTAACAAAACAAG3517202ACATGATGACCATCCATCCATAGTAACTGAATGGAGATTTATGATATATA
Capsicum annuum Takanotsume DNA, chromosome 3, sequence.
AP026698.1:3554419-3554438
ACACCTAATACTTTTATTTAACAAAACAAG3554419ACATGATGACCATCCATCCATAACTGAATGGGGATTTATGTTATATATAT
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 9.
CP124711.1:2488995-2489014
ACTCGTAGTATTATTATTTAACGAAACATG2488995ACATGATGACCATCCATCCATAGTAATTGACTGGAGATTTATGATATATA
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 9.
CP124711.1:2658920-2658939
ACTCCTAGTATTATTATTTAACGAAACATG2658920ACATGATGACCATCCATCCATAGTAAGTGAATGGAGATTTATGATATATA
Triticum timopheevii genome assembly, chromosome: 3G.
OY997266.1:164434911-164434930
TGGTGGAATTCGTTGTCACACGGATCGATG164434911ACATGATGACCATCCATCCATCCATCTCTCCATACCACATCCATCCATCC
Cepaea hortensis genome assembly, chromosome: 4.
OY992879.1:113388162-113388181
GTGGGATGGTCGAACTGCAAACGGTATGGC113388162ACATGATGACCATCCATCCATCCATCATGTGCCATGCCGGTAAGCGTGGG
Solea senegalensis genome assembly, chromosome: I.
OW185640.1:2373879-2373898
CCCTCATGCGGAGGATAAAGTGGTAGGTAA2373879TGGATGGATGGTCATCATGTGGGACCATACATGATACTGATGTTGTAAAA
Pelobates cultripes genome assembly, chromosome: 04.
OW240915.1:205887498-205887517
ACTCCTACAGTGCAAGCATTCAGCTCTGGA205887498TGGATGGATGGTCATCATGTCAAAAACTAATGAAACCATGGTGCTGATCT
KS20008F01 KS20 Capsicum annuum cDNA, mRNA sequence.
GD094066.1:204-223
TATATATCATAAATCCCCATTCAGTTACTA204TGGATGGATGGTCATCATGTCTTGTTTTGTTAAATAAAAGTACTACGAGT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 3.
CP124729.1:288788054-288788073
ATATATATAACATAAATCCCCATTCAGTTA288788054TGGATGGATGGTCATCATGTCTTGTTTTGTTAAATAAAAGTAGTAGGTGT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 3.
CP124729.1:288878364-288878383
ATATATATATAAATCCACATTCAGTTACTT288878364TGGATGGATGGTCATCATGTCTTGTTTTGTTGAATAAAAGTACTAGGTGT
Aelia acuminata genome assembly, chromosome: 3.
OU426981.1:119643666-119643685
TCCTTCTTTTTCTCTTCTTCTAAGAGTATT119643666TGGATGGATGGTCATCATGTGAAGTTCAGAGTGCATTAATCCTTAAGGAA
Pandemis heparana genome assembly, chromosome: 1.
OY978007.1:4398569-4398588
ATACGTAGTTCAGACAAAAACACATTTGGC4398569TGGATGGATGGTCATCATGTTATTATTGTGACCAAGATCTTATGTTAAAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ACATGATGACCATCCATCCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ACATGATGACCATCCATCCA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.096 | 0.088 | search_plus_done; http://172.18.8.135:50400/match?q=ACATGATGACCATCCATCCA&k=0&no_gap=0&offset=0&limit=50
0.223 | 0.127 | search_minus_done; http://172.18.8.135:50400/match?q=TGGATGGATGGTCATCATGT&k=0&no_gap=0&offset=0&limit=43
0.227 | 0.004 | cgi_end;

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