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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 12:55:31, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

TSA: Allium cepa CUDHLF2_5316 mRNA sequence.
JR848134.1:728-747
AGTGGGGCTCGTAGCCTTGGAGAAGCTGAA728ACATGCTGCGAGAAAGAGAAGATTAGATGCAATGCTTGTGAAACATTGAG
Allium cepa genome assembly, chromosome: 7.
LR994635.1:152924232-152924251
AGTGGGGCTCGTAGCCTTGGAGAAGCTGAA152924232ACATGCTGCGAGAAAGAGAAGATTAGATGCAATGCTTGTGAAACATTGAG
Chenopodium album genome assembly, chromosome: 19.
OX419226.1:42464069-42464088
GGTTGGATTAGTCGCGTTGGAGAAACTAAA42464069ACATGCTGCGAGAAAGAGAAAGATGGATGCCTTGTTGGTGAAACACTAGT
Incurvaria masculella genome assembly, chromosome: 17.
OX335657.1:13883184-13883203
CTGAATACGAGTGTTAGATCTTTATTATAA13883184ACATGCTGCGAGAAAGAGAAGGATCATGCGTAAATAATATTTAGTCTGGT
Sepiola atlantica genome assembly, chromosome: 22.
OY744536.1:89786780-89786799
GCACTAATAATGCACATAAAAAAAACATTG89786780ACATGCTGCGAGAAAGAGAAAAAGTAGACACAATTGCTAATGGCACATGC
Aspidapion aeneum genome assembly, chromosome: 4.
OY755041.1:123920673-123920692
ATCAGGTGCAATTCCAGATGCAGCAATGAT123920673ACATGCTGCGAGAAAGAGAAGACAGAGAGCGAGAGAGATGGGAGATTTCG
CBTN7091.g1_F21.ab1:P Triphysaria pusilla root tip normalized cDNA library Triphysaria pusilla cDNA, mRNA sequence.
EY158408.1:279-298
ATCAATGTTGCAGCAACATGGCATCCAATC279TTCTCTTTCTCGCAGCATGTTTTAATTTCTCGAGAGCTACAAGTCCCACT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACATGCTGCGAGAAAGAGAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACATGCTGCGAGAAAGAGAA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.172 | 0.163 | search_plus_done; http://172.18.8.135:50400/match?q=ACATGCTGCGAGAAAGAGAA&k=0&no_gap=0&offset=0&limit=50
0.315 | 0.143 | search_minus_done; http://172.18.8.135:50400/match?q=TTCTCTTTCTCGCAGCATGT&k=0&no_gap=0&offset=0&limit=44
0.316 | 0.001 | cgi_end;

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