GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 18:06:16, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Blennius ocellaris genome assembly, chromosome: 22.
OY730222.1:9634450-9634469
GTTGAAGAAGAAATGACAACAGACACTGCT9634450ACATGTTCATCCAACCATCAAGACAGTGGGTTCGGATGCAGTACAGACAG
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:31727349-31727368
TAACAAAATATTTTAGCAAATAATTGTTAT31727349ACATGTTCATCCAACCATCATGAGGTTTATTTTGCAATAATGACATCATA
Clostridium sticklandii str. DSM 519 chromosome, complete genome.
FP565809.1:2384839-2384858
ATTTACTATGTTCTAAACTATGGTGATCAA2384839ACATGTTCATCCAACCATCATACTTGGTTTTATTATATATTGTATATCCA
Salmo trutta genome assembly, chromosome: 5.
LR584433.1:25040638-25040657
TATAGGTTACAGGATGTGTGTGTGCGGAGG25040638TGATGGTTGGATGAACATGTGTGTGTGTGTGAGAGAGAGAGAGAGAAAGG
Coregonus sp. 'balchen' genome assembly, chromosome: 1.
LR778253.1:40630648-40630667
ATATAGGTTCAGCATGTGTGTGTGCGTGGG40630648TGATGGTTGGATGAACATGTGTGTGAGTGTGTGTGTGCATGATATATATA
Mobula hypostoma genome assembly, chromosome: 2.
OY992593.1:228527355-228527374
AAGGTAAGATACCATCTATCAGATGCTGAC228527355TGATGGTTGGATGAACATGTGTTAACGGGAGAGGTTGACCGCTGCTTCCA
Tachina lurida genome assembly, chromosome: 1.
OX101752.1:177694557-177694576
ATAGTAGACGGAATACACTGTGTATTCGTG177694557TGATGGTTGGATGAACATGTGTGTAAGCATACAAGTATGAGATAAACTGT
Tachina grossa genome assembly, chromosome: 1.
OX465274.1:193359026-193359045
TTGATAGTAGACGGACGCAGCGTATTCGTG193359026TGATGGTTGGATGAACATGTGTGTGGAGCATATGATATAGACTATTTGCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ACATGTTCATCCAACCATCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ACATGTTCATCCAACCATCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.100 | 0.092 | search_plus_done; http://172.18.8.135:50400/match?q=ACATGTTCATCCAACCATCA&k=0&no_gap=0&offset=0&limit=50
0.132 | 0.032 | search_minus_done; http://172.18.8.135:50400/match?q=TGATGGTTGGATGAACATGT&k=0&no_gap=0&offset=0&limit=47
0.136 | 0.003 | cgi_end;

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