GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 11:30:11, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Mesorhizobium sp. M8A.F.Ca.ET.057.01.1.1 chromosome.
CP034454.1:2332880-2332899
ATCGCCCAGGCGGCGGAGATGCCGAAGACG2332880ACATTGAGAGGCACCGAGATCGCCGCGACAAGCAGTGTCAGGTGGATGGC
Porphyra yezoensis cDNA, clone:PF023b04_r, 5'end.
AU188224.1:409-428
TTACTGCTGCTGCTGCTGCTGTGGTTTGGC409ATCTCGGTGCCTCTCAATGTGCTCGGCGCATATGCGGNGTACAAGGCTAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ACATTGAGAGGCACCGAGAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ACATTGAGAGGCACCGAGAT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.102 | 0.094 | search_plus_done; http://172.18.8.135:50400/match?q=ACATTGAGAGGCACCGAGAT&k=0&no_gap=0&offset=0&limit=50
0.122 | 0.020 | search_minus_done; http://172.18.8.135:50400/match?q=ATCTCGGTGCCTCTCAATGT&k=0&no_gap=0&offset=0&limit=49
0.123 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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