GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-10 10:34:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lactuca saligna genome assembly, chromosome: 4.
OX465080.1:49285228-49285251
AAGTGTGACACCTCAAATGGTTCACACAAC49285228ACCAAATACACCTGGAATAACTTGAGAGAAACTAGAACACTTCATGAAATCGGT
Lactuca saligna genome assembly, chromosome: 5.
OX465081.1:36062378-36062401
AAGTGTGACACCTCAAATGGCTCACAGAAC36062378ACCAAATACACCTGGAATAACTTGAGAGAAACTTGAACACTTCTAAAATTGGCT
Lactuca saligna genome assembly, chromosome: 6.
OX465082.1:102498107-102498130
AAGTGTGACACCTCAAATGGTTCAAAAAAC102498107ACCAAATACACCTGGAATAACTTGAGAGAATATACACACTTCATGAAAATCAGC
Lactuca saligna genome assembly, chromosome: 1.
OX465077.1:137582732-137582755
GCTAATTTTCATGAAGTGTGTAGATTCTCT137582732CAAGTTATTCCAGGTGTATTTGGTGTTGTGTGAACCATTTGAGGTGTCACACTT
Lactuca saligna genome assembly, chromosome: 2.
OX465078.1:115316477-115316500
TAGCCAATTTCATGAGTTGTAGAATTCTCT115316477CAAGTTATTCCAGGTGTATTTGGTGTTGTGTGAACCATTTGAGGTGTCACACTT
Lactuca saligna genome assembly, chromosome: 4.
OX465080.1:49314479-49314502
ACCGATTTCATGAAGTGTTCTAGTTTCTCT49314479CAAGTTATTCCAGGTGTATTTGGTGTTGTGTGAACCATTTGAGGTGTCACACTT
Lactuca saligna genome assembly, chromosome: 5.
OX465081.1:235156371-235156394
AGCCGATTTTAGAAGTGTTAAAGTTTCTCT235156371CAAGTTATTCCAGGTGTATTTGGTGTTGTGTGAACCATTTGATGTGTCACACTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ACCAAATACACCTGGAATAACTTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ACCAAATACACCTGGAATAACTTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.093 | 0.085 | search_plus_done; http://172.18.8.135:50400/match?q=ACCAAATACACCTGGAATAACTTG&k=0&no_gap=0&offset=0&limit=50
0.109 | 0.016 | search_minus_done; http://172.18.8.135:50400/match?q=CAAGTTATTCCAGGTGTATTTGGT&k=0&no_gap=0&offset=0&limit=47
0.112 | 0.003 | cgi_end;

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