GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-25 22:39:42, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Taurulus bubalis genome assembly, chromosome: 4.
OU342714.1:191309-191328
CTTCTTTGATTTTTGTAACTTTCCCAAACT191309ACCAATCACACCCACATCAACCAGTGACTTTCACAGGTGAGCTTAGAGGT
Vigna angularis mRNA, clone: VES06M22.
HX944649.1:5-24
AAAT5ACCAATCACACCCACATCAATATCACTTCATATAATAATAATAATAATGA
Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari.
AP015038.1:1180783-1180802
GTGTCATGAACATGTACTAGTCAACAAAAT1180783ACCAATCACACCCACATCAATATCACTTCATATAATAATAATAATAATGA
Vespertilio murinus genome assembly, chromosome: 3.
OZ004706.1:49466740-49466759
CAGAACTAGTCTTAATCACTCAACATCACA49466740TTGATGTGGGTGTGATTGGTGGTTGCTGGCCCTGATCGCCCCTGACAGTT
Scyliorhinus canicula genome assembly, chromosome: 3.
LR744032.1:38327351-38327370
GATTGAAACGTCTACTTTTTTTCATTTTCA38327351TTGATGTGGGTGTGATTGGTTAGGCTGGCATTTGCCCATCCCTAATTGCC
Sambucus nigra genome assembly, chromosome: 16.
OX422222.1:133800502-133800521
ATGGGTTTGTTGATTTTTTTTAAGGATACT133800502TTGATGTGGGTGTGATTGGTTGTGATAAAGATTGGGGTTTTAATTGTCCT
Oligia strigilis genome assembly, chromosome: 20.
OX637560.1:12549740-12549759
GGTGTCATGATATGTATAGACTTTGTGTTG12549740TTGATGTGGGTGTGATTGGTGTGTTGTGTGCACGGAATAGATAAATTATC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ACCAATCACACCCACATCAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ACCAATCACACCCACATCAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.277 | 0.268 | search_plus_done; http://172.18.8.135:50400/match?q=ACCAATCACACCCACATCAA&k=0&no_gap=0&offset=0&limit=50
0.497 | 0.220 | search_minus_done; http://172.18.8.135:50400/match?q=TTGATGTGGGTGTGATTGGT&k=0&no_gap=0&offset=0&limit=47
0.500 | 0.003 | cgi_end;

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