GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 22:40:07, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Aegilops speltoides subsp. speltoides genome assembly, chromosome: 6B.
OX082602.1:72610409-72610428
CACTTGACCTCTCGTCGCACCGATGAGCAG72610409ACCACCACCAGAATCATCGTCCGGCATCCGCTGCCGCTTCAGGTTGTTGT
Pyrus communis genome assembly, chromosome: 3.
OY757070.1:18603478-18603497
TTTTGTCCAAACACCACCCTCATTAGTCGC18603478ACCACCACCAGAATCATCGTCCACATTTCAAAGGTTAATGCATCACCATC
Serratia rhizosphaerae strain KUDC3025 chromosome, complete genome.
CP041764.1:1287169-1287188
AAGGTGCCGTAAATCGTCAGCACCGCCACC1287169ACCACCACCAGAATCATCGTCACCTTACGCGCCAACACCACCGCGGCACG
Serratia sp. JUb9 strain MYb239 chromosome.
CP060416.1:4151904-4151923
AAGGTGCCGTAAATCGTCAGCACCGCCACC4151904ACCACCACCAGAATCATCGTCACCTTACGCGCCAACACCACCGCGGCACG
Serratia rubidaea strain NCTC10848 genome assembly, chromosome: 1.
LS483492.1:4117291-4117310
AAGGTGCCGTAAATCGTCAGCACCGCCACC4117291ACCACCACCAGAATCATCGTCACCTTACGCGCCAACACCACCGCGGCACG
Piscicola geometra genome assembly, chromosome: 13.
OX030967.1:5880502-5880521
ATCACCACCACCAGCATCATCGTCATCACC5880502ACCACCACCAGAATCATCGTCATCTTCATCATCATCATCATCATCATCAT
Lumbricus rubellus genome assembly, chromosome: 15.
OX243825.1:23912355-23912374
ATCGTCATAATCATCATCACCATCACTACC23912355ACCACCACCAGAATCATCGTAATCATCATCATCATCATCATCATCATCAT
Phragmites australis genome assembly, chromosome: 19.
OY282630.1:5478146-5478165
CTTATGGTGGTGGTGGTGAGGATTGCAACA5478146ACGATGATTCTGGTGGTGGTGGTTATACTGGTGAAGGTGTTGATGTGGCG
Serratia sp. MYb239 chromosome, complete genome.
CP023268.1:771320-771339
CGTGCCGCGGTGGTGTTGGCGCGTAAGGTG771320ACGATGATTCTGGTGGTGGTGGTGGCGGTGCTGACGATTTACGGCACCTT
Serratia rubidaea strain FDAARGOS_880 chromosome, complete genome.
CP065717.1:987137-987156
CGTGCCGCGGTGGTGTTGGCGCGTAAGGTG987137ACGATGATTCTGGTGGTGGTGGTGGCGGTGCTGACGATTTACGGCACCTT
Serratia sp. Tan611 genome assembly, chromosome: Tan611.
LR994655.1:849679-849698
CGTGCCGCGGTGGTGTTGGCGCGTAAGGTG849679ACGATGATTCTGGTGGTGGTGGTGGCGGTGCTGACGATTTACGGCACTTT
Sepiola atlantica genome assembly, chromosome: 34.
OY744548.1:47388758-47388777
TGTAATTTTTATTTGATGGAAAATTATCCC47388758ACGATGATTCTGGTGGTGGTGATAGTAGATACATTGTAGTGGGTAAAAGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ACCACCACCAGAATCATCGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ACCACCACCAGAATCATCGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.089 | 0.080 | search_plus_done; http://172.18.8.135:50400/match?q=ACCACCACCAGAATCATCGT&k=0&no_gap=0&offset=0&limit=50
0.107 | 0.018 | search_minus_done; http://172.18.8.135:50400/match?q=ACGATGATTCTGGTGGTGGT&k=0&no_gap=0&offset=0&limit=43
0.110 | 0.003 | cgi_end;

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