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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:13:23, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Warburgia ugandensis isolate CL-2023a chromosome 3.
CP141128.1:73295724-73295745
AAGCTCACCCATTGTTCCAGAAGCATCACC73295724ACCACCGTAGAAAGTAGCATGGGCGTTAGACCATCCACCTCCATAGCCATGA
Chenopodium album genome assembly, chromosome: 3.
OX419210.1:82999683-82999704
GAACATACCCATGGTGCCAGAAGCATCCGC82999683ACCACCGTAGAAAGTAGCATGGGCAGTTTGCCATGAACCACCTTGGTAATTT
Chenopodium album genome assembly, chromosome: 12.
OX419219.1:2688472-2688493
GAACATACCCATGGTGCCAGAAGCATCAGC2688472ACCACCGTAGAAAGTAGCATGGGCAGTTTGCCATGAACCACCTTGGTAATTT
RCLE791TP Castor bean cDNA library from leaves, 1.7 kb Ricinus communis cDNA clone RCLE791, mRNA sequence.
EG656474.1:172-193
TGTTTACACTGGTGGGTCTTGGGAGAGTGC172CCATGCTACTTTCTACGGTGGTAGTGACGCCTCTGGCACCATGGGTGGCGCT
RCLE332TP Castor bean cDNA library from leaves, 1.7 kb Ricinus communis cDNA clone RCLE332, mRNA sequence.
EG660321.1:53-74
TGTTTACACTGGTGGGTCTTGGGAGAGTGC53CCATGCTACTTTCTACGGTGGTAGTGACGCCTCTGGCACCATGGGTGGCGCT
RCLFH87TP Castor bean cDNA library from leaves, 1.7 kb Ricinus communis cDNA clone RCLFH87, mRNA sequence.
EG660739.1:175-196
TGTTTACACTGGTGGGTCTTGGGAGAGTGC175CCATGCTACTTTCTACGGTGGTAGTGACGCCTCTGGCACCATGGGTGGCGCT
RCLFU58TP Castor bean cDNA library from leaves, 1.7 kb Ricinus communis cDNA clone RCLFU58, mRNA sequence.
EG661896.1:173-194
TGTTTACACTGGTGGGTCTTGGGAGAGTGC173CCATGCTACTTTCTACGGTGGTAGTGACGCCTCTGGCACCATGGGTGGCGCT
RCLGB70TP Castor bean cDNA library from leaves, 1.7 kb Ricinus communis cDNA clone RCLGB70, mRNA sequence.
EG663508.1:28-49
TTTACACTGGTGGGTCTTGGGAGAGTG28CCATGCTACTTTCTACGGTGGTAGTGACGCCTCTGGCACCATGGGTGGCGCT
RCRB479TP Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRB479, mRNA sequence.
EG686478.1:330-351
TGTTTACACTGGTGGGTCTTGGGAGAGTGC330CCATGCTACTTTCTACGGTGGTAGTGACGCCTCTGGCACCATGGGTGGCGCT
RCSAS56TP Castor bean cDNA library from seeds (12-33 days after pollination), 1.4 kb Ricinus communis cDNA clone RCSAS56, mRNA sequence.
EG692399.1:304-325
TGTTTACACTGGTGGGTCTTGGGAGAGTGC304CCATGCTACTTTCTACGGTGGTAGTGACGCCTCTGGCACCATGGGTGGCGCT
Misopates orontium genome assembly, chromosome: 2.
OX326947.1:19420987-19421008
CTGCATACATTCTACATATGGCGATTTTGG19420987CCATGCTACTTTCTACGGTGGTGGCGATGCATCTGGCACAATGGGTAAATAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACCACCGTAGAAAGTAGCATGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACCACCGTAGAAAGTAGCATGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.159 | 0.150 | search_plus_done; http://172.18.8.135:50400/match?q=ACCACCGTAGAAAGTAGCATGG&k=0&no_gap=0&offset=0&limit=50
0.792 | 0.633 | search_minus_done; http://172.18.8.135:50400/match?q=CCATGCTACTTTCTACGGTGGT&k=0&no_gap=0&offset=0&limit=47
0.797 | 0.006 | cgi_end;

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