GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 05:11:29, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Picea abies EST, clone K0000400048H08F1.
AM174478.1:228-247
ACAATACAGCTTTGCAGGGCAGATGTGTCC228ACCATTGCTTTTGGACTTGCTGCATCAACTGCATCCATAGTCTTAGCAGG
109F08_544403 Douglas-fir cDNA library PmIFG_73-6 Pseudotsuga menziesii var. menziesii cDNA clone Df109-F08 5, mRNA sequence.
CN635075.1:281-300
ACAATACAGCTTTGCAGGGCAGATGTATCC281ACCATTGCTTTTGGACTTGCTGCATCAACTGCATCCATAGTCTTANCAGG
Dianthus caryophyllus mRNA, clone: CES05B20, 5' end sequence.
FY384026.1:4-23
GGG4ACCATTGCTTTTGGACTTGCCAACACTTTTCCTCCTTCTTCTTCTTCTTC
Dianthus caryophyllus mRNA, clone: CFES23E16, 5' end sequence.
FY402545.1:13-32
GAGGAAATGCGG13ACCATTGCTTTTGGACTTGCCAACACTTTTCCTCCTTCTTCTTCTTCTTC
Dianthus caryophyllus mRNA, clone: CFES23K17, 5' end sequence.
FY402689.1:42-61
TAATTGAAGAATAGTGGTGAGGAAATGCGG42ACCATTGCTTTTGGACTTGCCAACACTTTTCCTCCTTCTTCTTCTTCTTC
Apamea monoglypha genome assembly, chromosome: 17.
OU426931.1:17637176-17637195
CTAAGGTTCGATATAGATCTTTCTCGTACA17637176ACCATTGCTTTTGGACTTGCGTTGATCCCTTTTGGACTTGGTCAAAAATA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ACCATTGCTTTTGGACTTGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ACCATTGCTTTTGGACTTGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.517 | 0.508 | search_plus_done; http://172.18.8.135:50400/match?q=ACCATTGCTTTTGGACTTGC&k=0&no_gap=0&offset=0&limit=50
0.547 | 0.030 | search_minus_done; http://172.18.8.135:50400/match?q=GCAAGTCCAAAAGCAATGGT&k=0&no_gap=0&offset=0&limit=44
0.547 | 0.000 | cgi_end;

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