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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 11:46:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

000816AAFB001205HT (AAFB) Royal Gala apple skin peel, tree-ripened fruit 150 DAFB Malus domestica cDNA clone AAFB001205, mRNA sequence.
CN860212.1:32-54
TTTTTTTTAAAAATCAAATGATGTGATGCT32ACCATTTCATTTCCAACGAGTCCGAGCCATACATCCAACGCACACAGAGAATC
000823AALA002266HT (AALA) Royal Gala 150 DAFB fruit cortex Malus domestica cDNA clone AALA002266, mRNA sequence.
CN862654.1:24-46
TTTTTTTTTTTTGATGGGATGCT24ACCATTTCATTTCCAACGAGTCCGAGCCATACATCCAACGCACACAGAGAATC
000919AALA004809HT (AALA) Royal Gala 150 DAFB fruit cortex Malus domestica cDNA clone AALA004809, mRNA sequence.
CN863496.1:34-56
TTTTTTTTAAGAATCAAATGATGTGATGCT34ACCATTTCATTTCCAACGAGTCCGAGCCATACATCCAACGCACACAGAGAATC
000815AALB001400HT (AALB) Royal Gala 150 DAFB fruit cortex Malus domestica cDNA clone AALB001400, mRNA sequence.
CN865370.1:82-104
TTTTTTCAAAGAATCAAATGATGGGATGCT82ACCATTTCATTTCCAACGAGTCCGAGCCATACATCCAACGCACACAGAGAATC
000815AALB001647HT (AALB) Royal Gala 150 DAFB fruit cortex Malus domestica cDNA clone AALB001647, mRNA sequence.
CN865489.1:43-65
TTTTTTTTAAGAATCAAATGATGTGATGCT43ACCATTTCATTTCCAACGAGTCCCAGCCATACATCCAACGCACACAGAGAATC
021014ABCA003859HT (ABCA) Royal Gala fruit stored at 0.5 degrees C for 24 hours Malus domestica cDNA clone ABCA003859, mRNA sequence.
CN902231.1:33-55
TTTTTTTTAAGAATCAAATGATGTGATGCT33ACCATTTCATTTCCAACGAGTCCGAGCCATACATCCAACGCACACAGAGAATC
030115ABOB999074HT (ABOB) Crab apple mature fruit Malus sieboldii cDNA clone ABOB999074, mRNA sequence.
CN914968.1:34-56
TTTTAACTAAGAATCAAATGATGTGATGCT34ACCATTTCATTTCCAACGAGTCCGAGCCATACATCCAACGCACACAGAGAATC
030627ABOC001100HT (ABOC) Crab apple mature fruit Malus sieboldii cDNA clone ABOC001100, mRNA sequence.
CN915099.1:91-113
ACATAACTAAGAATCAAATGATGTGATGCT91ACCATTTCATTTCCAACGAGTCCGAGCCATACATCCAACGCACACAGAGAATC
030629ABOC001605HT (ABOC) Crab apple mature fruit Malus sieboldii cDNA clone ABOC001605, mRNA sequence.
CN915503.1:13-35
TGATGTGATGCT13ACCATTTCATTTCCAACGAGTCCGAGCCATACATCCAACGCACACAGAGAATC
030629ABOC001625HT (ABOC) Crab apple mature fruit Malus sieboldii cDNA clone ABOC001625, mRNA sequence.
CN915516.1:37-59
TTTTTTTTAAGAATCAAATGATGTGATGCT37ACCATTTCATTTCCAACGAGTCCGAGCCATACATCCAACGCACACAGAGAATC
030629ABOC001647HT (ABOC) Crab apple mature fruit Malus sieboldii cDNA clone ABOC001647, mRNA sequence.
CN915527.1:23-45
AAGAATCAAATGATGTGATGCT23ACCATTTCATTTCCAACGAGTCCGAGCCATACATCCAACGCACACAGAGAATC
030707ABOC002245HT (ABOC) Crab apple mature fruit Malus sieboldii cDNA clone ABOC002245, mRNA sequence.
CN915662.1:27-49
TTTTAAGAATCAAATGATGTGATGCT27ACCATTTCATTTCCAACGAGTCCGAGCCATACATCCAACGCACACAGAGAATC
030707ABOC002359HT (ABOC) Crab apple mature fruit Malus sieboldii cDNA clone ABOC002359, mRNA sequence.
CN915730.1:37-59
TTTTTTTTAAGAATCAAATGATGTGATGCT37ACCATTTCATTTCCAACGAGTCCGAGCCATACATCCAACGCACACAGAGAATC
030707ABOC002381HT (ABOC) Crab apple mature fruit Malus sieboldii cDNA clone ABOC002381, mRNA sequence.
CN915743.1:24-46
TAAGAATCAAATGATGTGATGCT24ACCATTTCATTTCCAACGAGTCCGAGCCATACATCCAACGCACACAGAGAATC
000304AVBB007375HT (AVBB) Royal Gala young shoot Malus domestica cDNA clone AVBB007375, mRNA sequence.
CN936404.1:23-45
AAGAATCAAATGATGTGATGCT23ACCATTTCATTTCCAACGAGTCCGAGCCATACATCCAACGCACACAGAGAATC
Mdlv3_4029k23.y1 Mdlv3 Malus domestica cDNA clone Mdlv3_4029k23 5' similar to SW:THI4_ALNGL Q38709 THIAZOLE BIOSYNTHETIC ENZYME PRECURSOR, mRNA sequence.
CV628508.1:52-74
TTTTTTTTAAAAATCAAATGATGTGATGCT52ACCATTTCATTTCCAACGAGTCCAAACCATACATCCAACGCACACAAAAAATC
Mdlr7008A08.g1 Apple_EST_Mdlr Malus domestica cDNA similar to sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplast precursor pir|T10474 thiamin biosynthesis protein thi1 - sweet orange emb|C
DR991364.1:33-55
ACGGGGTTAAGAATCAAATGATGTGATGCT33ACCATTTCATTTCCAACGAGTCCGAGCCATACATCCAACGCATTCAGAGAATC
Mdfb8004D23.g1 Apple_EST_Mdfb Malus domestica cDNA similar to sp|Q38709|THI4_ALNGL Thiazole biosynthetic enzyme, chloroplast precursor (AG6) emb|CAA66064.1| thaizole biosynthetic enzmye [Alnus glutino
DR997531.1:9-31
CACGAGGT9ACCATTTCATTTCCAACGAGTCCGAGCCATACATCCAACGCACACAGAGAATC
011023ABEA002432HT (ABEA) Royal Gala seedling leaves infected with Venturia inaequalis Malus domestica cDNA clone ABEA002432, mRNA sequence.
EB148878.1:33-55
TTTTTTTTAAGAATCAAATGATGTGATGCT33ACCATTTCATTTCCAACGAGTCCGAGCCATACATCCAACGCACACAGAGAATC
ff_02E12 Md_fruit-fruit_subtractive_cDNA_library Malus domestica cDNA, mRNA sequence.
GD254836.1:53-75
TTTTTTTTTTTAGTCAAATGATGTGATGCT53ACCATTTCATTTCCAACGAGTCCGAGCCATACATCCAACGCACACAGAGAATC
fl_03A03 Md_fruit-leaf_subtractive_cDNA_library Malus domestica cDNA, mRNA sequence.
GD254983.1:61-83
TTTCTTTTAAAAATCAAATGATGTGATGCT61ACCATTTCATTTCCAACGAGTCCGAGCCATACATCCAACGCACACAGAGAATC
fl_03B06 Md_fruit-leaf_subtractive_cDNA_library Malus domestica cDNA, mRNA sequence.
GD254984.1:42-64
TTTTTTTTTTTTTTTTTTTGGGGGGATGCT42ACCATTTCATTTCCAACGAGTCCGAACCATACATCCAACGCACACAGAGAATC
fl_04A03 Md_fruit-leaf_subtractive_cDNA_library Malus domestica cDNA, mRNA sequence.
GD255079.1:41-63
TTTTTTTTTTTTTTTTTTTGGTGGGATGCT41ACCATTTCATTTCCAACGAGTCCGAGCCATACATCCAACGCACACAGAGAATC
Mdlr7010I17_e24883.b1 Apple_EST_Mdlr Malus domestica cDNA 3' similar to sp|Q38709|THI4_ALNGL Thiazole biosynthetic enzyme, chloroplast precursor (AG6) emb|CAA66064.1| thaizole biosynthetic enzmye [Aln
GO548916.1:2-24
T2ACCATTTCATTTCCAACGAGTCCGAGCCATACATCCAACGCACACAGAGAATC
Mdwdl7502B16_e33695.g1 Apple_EST_Mdwdl Malus domestica cDNA 5' similar to sp|Q38709|THI4_ALNGL Thiazole biosynthetic enzyme, chloroplast precursor (AG6) emb|CAA66064.1| thaizole biosynthetic enzmye [A
GO556760.1:48-70
TTTTTTTTAAGAATCAAATGAAGGGATGGT48ACCATTTCATTTCCAACGAGTCCGAGCCATACATCCAACGCACACAGAGAATC
Malus hybrid cultivar cultivar Flame chromosome 3.
CP141929.1:29231920-29231942
ACATAACTAAGAATCAAATGATGTGATGCT29231920ACCATTTCATTTCCAACGAGTCCGAGCCATACATCCAACGCACACAGAGAATC
Malus hybrid cultivar cultivar SH6 chromosome 3.
CP143360.1:28334809-28334831
ACATAACTAAGAATCAAATGATGTGATGCT28334809ACCATTTCATTTCCAACGAGTCCGAGCCATACATCCAACGCACACAGAGAATC
Malus hybrid cultivar cultivar SH6 chromosome 3.
CP143377.1:26401495-26401517
AAAACGGTAATACCAAAGAGATGTGATGCT26401495ACCATTTCATTTCCAACGAGTCCGAGCCAAACATCCAACACACACAGAGAATC
Malus sylvestris genome assembly, chromosome: 3.
OU696505.1:27739251-27739273
ACATAACTAAGAATCAAATGATGTGATGCT27739251ACCATTTCATTTCCAACGAGTCCGAGCCATACATCCAACGCACACAGAGAATC
Malus domestica genome assembly, chromosome: 3.
OU696679.1:28962322-28962344
ACATAACTAAGAATCAAATGATGTGATGCT28962322ACCATTTCATTTCCAACGAGTCCGAGCCATACATCCAACGCACACAGAGAATC
Malus domestica genome assembly, chromosome: 3.
OU744544.1:29279542-29279564
ACATACCTAAGAATCAAATGATGTGATGCT29279542ACCATTTCATTTCCAACGAGTCCGAGCCAAACATCCAACGCACACAGAGAATC
Malus domestica genome assembly, chromosome: 3.
OU744955.1:28096804-28096826
ACATAACTAAGAATCAAATGATGTGATGCT28096804ACCATTTCATTTCCAACGAGTCCGAGCCATACATCCAACGCACACAGAGAATC
Malus domestica genome assembly, chromosome: 3.
OU744993.1:29318001-29318023
ACATACCTAAGAATCAAATGATGTGATGCT29318001ACCATTTCATTTCCAACGAGTCCGAGCCAAACATCCAACGCACACAGAGAATC
Malus x robusta genome assembly, chromosome: 6.
OY720330.1:28332296-28332318
ACATAACTAAGAATCAAATGATGTGATGCT28332296ACCATTTCATTTCCAACGAGTCCGAGCCATACATCCAACGCACACAGAGAATC
000917AALA003742HT (AALA) Royal Gala 150 DAFB fruit cortex Malus domestica cDNA clone AALA003742, mRNA sequence.
CN863122.1:255-277
GATTCTCTGTGTGCGTTGGATGTATGGCTC255GGACTCGTTGGAAATGAAATGGTAGCATCACATCATTTGATTCTTAAAAAAAA
000922AALA007531HT (AALA) Royal Gala 150 DAFB fruit cortex Malus domestica cDNA clone AALA007531, mRNA sequence.
CN864482.1:261-283
GATTCTCTGTGTGCGTTGGATGTATGGCTC261GGACTCGTTGGAAATGAAATGGTAGCATCACATCATTTGATTCTTAAAAAAAA
000922AALA007572HT (AALA) Royal Gala 150 DAFB fruit cortex Malus domestica cDNA clone AALA007572, mRNA sequence.
CN864502.1:396-418
GATTCTCTGTGTGCGTTGGATGTATGGCTC396GGACTCGTTGGAAATGAAATGGTAGCATCACATCATTTGATTCTTAGTTATGT
000930AALA009095HT (AALA) Royal Gala 150 DAFB fruit cortex Malus domestica cDNA clone AALA009095, mRNA sequence.
CN864924.1:376-398
GATTCTCTGTGTGCGTTGGATGTATGGCTC376GGACTCGTTGGAAATGAAATGGTAGCATCACATCATTTGATTCTTAAAAAAAA
010513AAXA002353HT (AAXA) Royal Gala 126 DAFB fruit core Malus domestica cDNA clone AAXA002353, mRNA sequence.
CN891134.1:568-590
GATTCTCTGTGTGCGTTGGATGTATGGCTC568GGACTCGTTGGAAATGAAATGGTAGCATCACATCATTTGATTCTTAGTTATGT
010625AAYA002708HT (AAYA) Royal Gala 126 DAFB fruit cortex Malus domestica cDNA clone AAYA002708, mRNA sequence.
CN894305.1:189-211
GATTCTCTGTGTGCGTTGGATGTATGGCTC189GGACTCGTTGGAAATGAAATGGTAGCATCACATCATTTGATTCTTAGTTATGT
010626AAYA005016HT (AAYA) Royal Gala 126 DAFB fruit cortex Malus domestica cDNA clone AAYA005016, mRNA sequence.
CN895360.1:376-398
GATTCTCTGTGTGCGTTGGATGTATGGCTC376GGACTCGTTGGAAATGAAATGGTAGCATCACATCATTTGATTCTTAGTTATGT
010626AAYA005052HT (AAYA) Royal Gala 126 DAFB fruit cortex Malus domestica cDNA clone AAYA005052, mRNA sequence.
CN895383.1:376-398
GATTCTCTGTGTGCGTTGGATGTATGGCTC376GGACTCGTTGGAAATGAAATGGTAGCATCACATCATTTGATTCTTAGTTATGT
021016ABCA003574HT (ABCA) Royal Gala fruit stored at 0.5 degrees C for 24 hours Malus domestica cDNA clone ABCA003574, mRNA sequence.
CN903132.1:649-671
GATTCTCTGTGTGCGTTGGATGTATGGCTC649GGACTCGTTGGAAATGAAATGGTAGCATCACATCATTTGATT
021016ABCA003694HT (ABCA) Royal Gala fruit stored at 0.5 degrees C for 24 hours Malus domestica cDNA clone ABCA003694, mRNA sequence.
CN903194.1:605-627
GATTCTCTGTGTGCGTTGGATGTATGGCTC605GGACTCGTTGGAAATGAAATGGTAGCATCACATCATTTGATTCTTTAAAA
010819ABDA999086HT (ABDA) Royal Gala fruit stored for 24 hours under low oxygen/high CO2 Malus domestica cDNA clone ABDA999086, mRNA sequence.
CN904082.1:569-591
GATTCTCTGTGTGCGTTGGATGTATGGCTC569GGACTCGTTGGAAATGAAATGGTAGCATCACATCAAAAAAAA
010819ABDA999094HT (ABDA) Royal Gala fruit stored for 24 hours under low oxygen/high CO2 Malus domestica cDNA clone ABDA999094, mRNA sequence.
CN904084.1:547-569
GATTCTCTGTGTGCGTTGGATGTATGGCTC547GGACTCGTTGGAAATGAAATGGTAGCATCACATC
010929ABDA005738HT (ABDA) Royal Gala fruit stored for 24 hours under low oxygen/high CO2 Malus domestica cDNA clone ABDA005738, mRNA sequence.
CN906140.1:503-525
GATTCTCTGTGTGCGTTGGATGTATGGCTC503GGACTCGTTGGAAATGAAATGGTAGCATCACATCATTTGATTCTTAGTTATG
011003ABDA006762HT (ABDA) Royal Gala fruit stored for 24 hours under low oxygen/high CO2 Malus domestica cDNA clone ABDA006762, mRNA sequence.
CN906712.1:54-76
GGATTCTCTGTGTGCGTTGGATGTTGGCTC54GGACTCGTTGGAAATGAAATGGTAGCATCACATCATTTGATTCTTAGTTATGT
030629ABOC002104HT (ABOC) Crab apple mature fruit Malus sieboldii cDNA clone ABOC002104, mRNA sequence.
CN915594.1:463-485
GATTCTCTGTGTGCGTTGGATGTATGGCTC463GGACTCGTTGGAAATGAAATGGTAGCATCACATCATTTGATTC
Mdfw2056o04.y1 Mdfw Malus domestica cDNA clone Mdfw2056o04 5', mRNA sequence.
CO052014.1:197-219
GATTCTCTGTGTGCGTTGGATGTATGGCTC197GGACTCGTTGGAAATGAAATGGTAGCATCACATCATTTGATTCTTAAGAAAAA
Malus hybrid cultivar cultivar Royalty chromosome 3.
CP141972.1:9554736-9554758
GATTCTCTGTGTGCGTTGGATGTATGGCTC9554736GGACTCGTTGGAAATGAAATGGTAGCATCACATCATTTGATTCTTAGTTATGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACCATTTCATTTCCAACGAGTCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACCATTTCATTTCCAACGAGTCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.748 | 1.739 | search_plus_done; http://172.18.8.135:50400/match?q=ACCATTTCATTTCCAACGAGTCC&k=0&no_gap=0&offset=0&limit=50
2.762 | 1.014 | search_minus_done; http://172.18.8.135:50400/match?q=GGACTCGTTGGAAATGAAATGGT&k=0&no_gap=0&offset=0&limit=16
2.774 | 0.011 | cgi_end;

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