GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-07 01:03:50, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Glycine max cultivar Williams 82 chromosome 14.
CP126439.1:24724841-24724860
TAACAGGGTGAACCGCCAAGCAATTCTGGT24724841ACCATTTCCACAACCTCAGCATATCCAACAACAACAACAACAACAACAAC
Glycine soja cultivar YSD56 chromosome 14.
CP154580.1:24713154-24713173
TAACAGGGTGAACCGCCAAGCAATTCTGGT24713154ACCATTTCCACAACCTCAGCATATCCAACAACAACAACAACAACAACCGC
Limnospira platensis BEA 1257B chromosome, complete genome.
CP162027.1:4791766-4791785
AATTAAACCGCTAACATAGCCTTTCTATAA4791766ACCATTTCCACAACCTCAGCCAGAAGCTTCATTCCTTCCATAATCTCCTC
Melanostigma gelatinosum genome assembly, chromosome: 5.
OX456502.1:20064435-20064454
TAACCTAACTGAACATCTACAAGGTCCTGA20064435ACCATTTCCACAACCTCAGCCGCGTTACCTAGAAACCAGTCATGTCATTA
Buteo buteo genome assembly, chromosome: 10.
OZ076929.1:6836981-6837000
GAAGGAGCTGGGAGTTGGGATCCAGAGGGA6836981ACCATTTCCACAACCTCAGCTGAAGGTGGCGCCCAGGGAAGGGTCATCTG
Sequence 7 from Patent WO2004074440.
CQ868542.1:3-22
AT3GCTGAGGTTGTGGAAATGGTACCAGAATTGCTTGGCGGTTCACCCTGTTA
Sequence 7 from patent US 7589256.
GP573632.1:3-22
AT3GCTGAGGTTGTGGAAATGGTACCAGAATTGCTTGGCGGTTCACCCTGTTA
Sequence 61968 from patent US 7569389.
GP694201.1:226-245
GTTGTTGTTGTTGTTGTTGTTGTTGGATAT226GCTGAGGTTGTGGAAATGGTACCAGAATTGCTTGGCGGTTCACCCTGTTA
Sequence 55679 from patent US 9012723.
HK619333.1:442-461
GTTGTTGTTGTTGTTGTTGTTGTTGGATAT442GCTGAGGTTGTGGAAATGGTACCAGAATTGCTTGGCGGGGGGGCCCGGTA
MAG: Limnospira indica BM01 chromosome.
CP060212.1:5256966-5256985
GAGGAGATTATGGAAGGAATGAAGCTTCTG5256966GCTGAGGTTGTGGAAATGGTTTATAGAAAGGCTATGTTAGCGGTTTAATT
sf20g11.y1 Gm-c1028 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1028-573 5', mRNA sequence.
AW234929.1:208-227
GTTGTTGTTGTTGTTGTTGTTGTTGGATAT208GCTGAGGTTGTGGAAATGGTACCAGAATTGCTTGGCGGTTCACCCTGTTA
a10g05 cDNA Peking library 2D SCN3 Glycine max cDNA clone a10g05 5', mRNA sequence.
BM108239.1:270-289
GTTGTTGTTGTTGTTGTTGTTGTTGGATAT270GCTGAGGTTGTGGAAATGGTACCAGAATTGCTTGGCGGTTCACCTGTTAA
sam02g05.y1 Gm-c1063 Glycine max cDNA clone SOYBEAN CLONE ID: Gm-c1063-4522 5' similar to TR:Q9ZS51 Q9ZS51 PEROXISOMAL MEMBRANE PROTEIN, mRNA sequence.
BM885587.1:192-211
GTTGTTGTTGTTGTTGTTGTTGTTGGATAT192GCTGAGGTTGTGGAAATGGTACCAGAATTGCTTGGCGGTTCACCCTGTTA
Adonis annua genome assembly, chromosome: 9.
OZ123184.1:547171455-547171474
GTCGTCTATGTTTCTACATAGTTGTCTTTA547171455GCTGAGGTTGTGGAAATGGTGTACAAGGTAGAGAGAGGGCCGAGAGTACA
Arenaria serpyllifolia genome assembly, chromosome: 14.
OZ174170.1:32811150-32811169
CATTATTATTATTGTTGGTTTGTGTTGTTT32811150GCTGAGGTTGTGGAAATGGTGGAAAAAATGCACAATGAAAAATTGAGCAT
Arenaria serpyllifolia genome assembly, chromosome: 17.
OZ174173.1:31894166-31894185
CATTATTATTATTGTTGGTTTGTGTTGTTT31894166GCTGAGGTTGTGGAAATGGTGGAAAAAATGCACAATGAAAAATTGAGCAT
Polygala serpyllifolia genome assembly, chromosome: 5.
OZ281940.1:23058288-23058307
GGACCTACGAAGTACAATTGGGAAGCTTAT23058288GCTGAGGTTGTGGAAATGGTGAAAAATCATGGCCTGAAACTCCAAGCTGT
Limnospira platensis C1 chromosome, complete genome.
CP019998.1:992941-992960
GAGGAGATTATGGAAGGAATGAAGCTTCTG992941GCTGAGGTTGTGGAAATGGTTTATAGAAAGGCTATGTTAGCGGTTTAATT
Arthrospira sp. TJSD092 chromosome, complete genome.
CP028914.1:344455-344474
GAGGAGATTATGGAAGGAATGAAGCTTCTG344455GCTGAGGTTGTGGAAATGGTTTATAGAAAGGCTATGTTAGCGGTTTAATT
Limnospira fusiformis SAG 85.79 chromosome, complete genome.
CP051185.1:355485-355504
GAGGAGATTATGGAAGGAATGAAGCTTCTG355485GCTGAGGTTGTGGAAATGGTTTATAGAAAGGCTATGTTAGCGGTTTAATT
Limnospira platensis DD chromosome.
CP146095.1:342886-342905
GAGGAGATTATGGAAGGAATGAAGCTTCTG342886GCTGAGGTTGTGGAAATGGTTTATAGAAAGGCTATGTTAGCGGTTTAATT
Arthrospira sp. str. PCC 8005 chromosome, complete genome.
FO818640.1:5256966-5256985
GAGGAGATTATGGAAGGAATGAAGCTTCTG5256966GCTGAGGTTGTGGAAATGGTTTATAGAAAGGCTATGTTAGCGGTTTAATT
Lepidochitona cinerea genome assembly, chromosome: 1.
OZ020551.1:2127417-2127436
AGGAATACTAACCAATATATTGTGAATTGT2127417GCTGAGGTTGTGGAAATGGTCCCAATGCATTACCATATTGTCCAGTGGTA
Leiobunum subalpinum genome assembly, chromosome: 7.
OZ239124.1:7998019-7998038
TTAATTATCCAAAATATGAAAATTATTTTG7998019GCTGAGGTTGTGGAAATGGTATAGGAAAAAACGTGGTCACGGTTAGTTCG
Mullus surmuletus genome assembly, chromosome: 19.
OZ255650.1:500307-500326
TAACAGAAAGACAGCCTGAGGGGGAGAAAT500307GCTGAGGTTGTGGAAATGGTCGGGGATTATTCAAAATTTACATAGCGATA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACCATTTCCACAACCTCAGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACCATTTCCACAACCTCAGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.473 | 0.463 | search_plus_done; http://172.18.8.135:50900/match?q=ACCATTTCCACAACCTCAGC&k=0&no_gap=0&offset=0&limit=50
0.921 | 0.449 | search_minus_done; http://172.18.8.135:50900/match?q=GCTGAGGTTGTGGAAATGGT&k=0&no_gap=0&offset=0&limit=45
0.935 | 0.014 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).