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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-08 20:24:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Acomys russatus genome assembly, chromosome: 26.
LR877237.1:43965560-43965579
AGACATTTCCAGGGGGACTGTAACACACCT43965560ACCCACCTTCATCAACAACCATGGTGCCCAAGATACCACCCCAAATCAGT
KR 1020140062712-A/29: A method for identifying hot pepper varieties using microsatellites markers.
DI378161.1:1-20
1ACCCACCTTCATCAACAACC
KS09056E10 KS09 Capsicum annuum cDNA, mRNA sequence.
CA516334.1:54-73
TCTCTAATGGAGCAGTCTGAGAGCTCATCA54ACCCACCTTCATCAACAACCAGAACAACAACAACAACAACAACCAACCGG
KS10022H10 KS10 Capsicum annuum cDNA, mRNA sequence.
CA519255.1:54-73
TCTCTAATGGAGCAGTCTGAGAGCTCATCA54ACCCACCTTCATCAACAACCAGAACAACAACAACAACAAAAACCAACCGG
BJ02012D10 BJ02 Capsicum annuum cDNA 5', mRNA sequence.
CO907079.1:30-49
CTCTAATGGAGCAGTCTGAGAGCTCATCA30ACCCACCTTCATCAACAACCAGAACAACAACAACAACAACAACCAACCGG
KS16001H04 KS16 Capsicum annuum cDNA, mRNA sequence.
GD069563.1:14-33
GCACGAGGCATCA14ACCCACCTTCATCAACAACCAGAACAACAACAACAACAACAACCAACCGG
KS16051C10 KS16 Capsicum annuum cDNA, mRNA sequence.
GD074226.1:52-71
TCTCTAATGGAGCAGTCTGAGAGCTCATCA52ACCCACCTTCATCAACAACCAGAACAACAACAACAACAACAACCAACCGG
KS17056G07 KS17 Capsicum annuum cDNA, mRNA sequence.
GD080781.1:38-57
GCTCTAATGGAGCAGTCTGAGAGCTCATCA38ACCCACCTTCATCAACAACCAGAACAACAACAACAACAACAACCAACCGG
Capsicum annuum Takanotsume DNA, chromosome 6, sequence.
AP026701.1:203083830-203083849
TCTCTAATGGAGCAGTCTGAGAGCTCATCA203083830ACCCACCTTCATCAACAACCAGAACAACAACAACAACAACAACCAACCGG
Solanum tuberosum clone AT_113.Z microsatellite sequence.
GQ415751.1:50-69
TCTCTAATGGAGCAGTCTGAGAGCTCATCA50ACCCACCTTCATCAACAACCAGAAGAAGAAGAAGAAGAACAACCAACCGG
Streptomyces sp. NBC_00197 chromosome, complete genome.
CP108128.1:7956616-7956635
GGGCGACAAGGGCAGCAGCCAGGACTCCCC7956616ACCCACCTTCATCAACAACCGCCTGTGGGGGACCGGCCGTTCGATCGAGT
Ceriagrion tenellum genome assembly, chromosome: 5.
OY720636.1:157017894-157017913
TCTCTCAGAGCGCGAGCCCGAGCCGCCTGG157017894ACCCACCTTCATCAACAACCGTGTCCGTGGCTGCTTACGCAAACAAAAAA
JP 2009538603-A/291: Modified Microbial Nucleic Acid.
FV536312.1:2162183-2162202
ATTTGATGATTTGGTTGGTGTTTTATAGGT2162183GGTTGTTGATGAAGGTGGGTGGTGAGTTTTGGTTGGTGTTTTTGTTGTTT
JP 2009538603-A/292: Modified Microbial Nucleic Acid.
FV536313.1:2162183-2162202
ATTTGATGATTTGGTTGGTGTTTTATAGGT2162183GGTTGTTGATGAAGGTGGGTGGTGAGTTTTGGTTGGTGTTTTTGTTGTTT
TSA: Capsicum annuum MGMT_Contig20515, mRNA sequence.
JW070759.1:803-822
TGTTGTTGTTGTTGTTGTTGTTGTTGTTCT803GGTTGTTGATGAAGGTGGGTTGATGAGCTCTCAGACTGCTCCATTAGAGA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 6.
CP124726.1:50410173-50410192
TGTTGTTGTTGTTGTTGTTGTTGTTGTTCT50410173GGTTGTTGATGAAGGTGGGTTGATGAGCTCTCAGACTGCTCCATTAGAGA
Triticum aestivum genome assembly, chromosome: 6A.
LR862523.1:91146766-91146785
GAGGCTTGGCCCCTCGCGAGGGTCTTGAGT91146766GGTTGTTGATGAAGGTGGGTCGTACCAGGCCACTGGAGGTGCCATGCCCT
Triticum aestivum genome assembly, chromosome: 7D.
LR862528.1:288401689-288401708
GAGGCTTGGCCCCTCGCGAGGGTCTTGAGT288401689GGTTGTTGATGAAGGTGGGTCGTACCAGGCCGTTGGCTGAGCCACGCCCT
Triticum aestivum genome assembly, chromosome: 6A.
LR862544.1:93488974-93488993
GAGGCTTGGCCCCTCGCGAGGGTCTTGAGT93488974GGTTGTTGATGAAGGTGGGTCGTACCAGGCCACTGGAGGTGCCATGCCCT
Triticum aestivum genome assembly, chromosome: 7D.
LR862549.1:288193844-288193863
GAGGCTTGGCCCCTCGCGAGGGTCTTGAGT288193844GGTTGTTGATGAAGGTGGGTCGTACCAGGCCGTTGGCTGAGCCACGCCCT
Triticum aestivum genome assembly, chromosome: 6A.
LR862565.1:97404568-97404587
GAGGCTTGGCCCCTCGCGAGGGTCTTGAGT97404568GGTTGTTGATGAAGGTGGGTCGTACCAGGCCACTGGAGGTGCCATGCCCT
Triticum aestivum genome assembly, chromosome: 7D.
LR862570.1:289842424-289842443
GAGGCTTGGCCCCTCGCGAGGGTCTTGAGT289842424GGTTGTTGATGAAGGTGGGTCGTACCAGGCCGTTGGCTGAGCCACGCCCT
Triticum aestivum genome assembly, chromosome: 6A.
LR865473.1:95957775-95957794
GAGGCTTGGCCCCTCGCGAGGGTCTTGAGT95957775GGTTGTTGATGAAGGTGGGTCGTACCAGGCCACTGGAGGTGCCATGCCCT
Triticum aestivum genome assembly, chromosome: 7D.
LR865478.1:289279420-289279439
GAGGCTTGGCCCCTCGCGAGGGTCTTGAGT289279420GGTTGTTGATGAAGGTGGGTCGTACCAGGCCGTTGGCTGAGCCACGCCCT
Triticum aestivum genome assembly, chromosome: 6A.
LR865494.1:67242728-67242747
GAGGCTTGGCCCCTCGCGAGGGTCTTGAGT67242728GGTTGTTGATGAAGGTGGGTCGTACCAGGCCACTGGAGGTGCCATGCCCT
Triticum aestivum genome assembly, chromosome: 7D.
LR865499.1:289366905-289366924
GAGGCTTGGCCCCTCGCGAGGGTCTTGAGT289366905GGTTGTTGATGAAGGTGGGTCGTACCAGGCCGTTGGCTGAGCCACGCCCT
Triticum aestivum genome assembly, chromosome: 6A.
LR865515.1:95101288-95101307
GAGGCTTGGCCCCTCGCGAGGGTCTTGAGT95101288GGTTGTTGATGAAGGTGGGTCATACCAGGCCACTGGAGGTGCCATGCCCT
Triticum aestivum genome assembly, chromosome: 7D.
LR865520.1:291115039-291115058
GAGGCTTGGCCCCTCGCGAGGGTCTTGAGT291115039GGTTGTTGATGAAGGTGGGTCGTACCAGGCCGTTGGCTGAGCCACGCCCT
Triticum aestivum genome assembly, chromosome: 6A.
LR865754.1:97883753-97883772
GAGGCTTGGCCCCTCGCGAGGGTCTTGAGT97883753GGTTGTTGATGAAGGTGGGTCGTACCAGGCCACTGGAGGTGCCATGCCCT
Triticum aestivum genome assembly, chromosome: 7D.
LR865759.1:291337999-291338018
GAGGCTTGGCCCCTCGCGAGGGTCTTGAGT291337999GGTTGTTGATGAAGGTGGGTCGTACCAGGCCGTTGGCTGAGCCACGCCCT
Triticum aestivum genome assembly, chromosome: 6A.
LR865775.1:94649620-94649639
GAGGCTTGGCCCCTCGCGAGGGTCTTGAGT94649620GGTTGTTGATGAAGGTGGGTCATACCAGGCCACTGGAGGTGCCATGCCCT
Triticum aestivum genome assembly, chromosome: 7D.
LR865780.1:286081199-286081218
GAGGCTTGGCCCCTCGCGAGGGTCTTGAGT286081199GGTTGTTGATGAAGGTGGGTCGTACCAGGCCGTTGGCTGAGCCACGCCCT
Triticum aestivum genome assembly, chromosome: 6A.
LR877324.1:95169166-95169185
GAGGCTTGGCCCCTCGCGAGGGTCTTGAGT95169166GGTTGTTGATGAAGGTGGGTCGTACCAGGCCACTGGAGGTGCCATGCCCT
Triticum aestivum genome assembly, chromosome: 7D.
LR877329.1:290692410-290692429
GAGGCTTGGCCCCTCGCGAGGGTCTTGAGT290692410GGTTGTTGATGAAGGTGGGTCGTACCAGGCCGTTGGCTGAGCCACGCCCT
Triticum aestivum genome assembly, chromosome: 6A.
LR878450.1:99456119-99456138
GAGGCTTGGCCCCTCGCGAGGGTCTTGAGT99456119GGTTGTTGATGAAGGTGGGTCGTACCAGGCCACTGGAGGTGCCATGCCCT
Triticum aestivum genome assembly, chromosome: 7D.
LR878455.1:287493075-287493094
GAGGCTTGGCCCCTCGCGAGGGTCTTGAGT287493075GGTTGTTGATGAAGGTGGGTCGTACCAGGCCGTTGGCTGAGCCACGCCCT
Triticum aestivum genome assembly, chromosome: 6A.
LS992095.1:96180540-96180559
GAGGCTTGGCCCCTCGCGAGGGTCTTGAGT96180540GGTTGTTGATGAAGGTGGGTCGTACCAGGCCACTGGAGGTGCCATGCCCT
Triticum aestivum genome assembly, chromosome: 7D.
LS992100.1:288177205-288177224
GAGGCTTGGCCCCTCGCGAGGGTCTTGAGT288177205GGTTGTTGATGAAGGTGGGTCGTACCAGGCCGTTGGCTGAGCCACGCCCT
Triticum turgidum subsp. durum genome assembly, chromosome: 6A.
LT934121.1:94476886-94476905
GAGGCTTGGCCCCTCGCGAGGGTCTTGAGT94476886GGTTGTTGATGAAGGTGGGTCGTACCAGGCCACTGGAGGTGCCATGCCCT
Triticum aestivum genome assembly, chromosome: 6A.
OU015736.1:101968952-101968971
GAGGCTTGGCCCCTCGCGAGGGTCTTGAGT101968952GGTTGTTGATGAAGGTGGGTCGTACCAGGCCACTGGAGGTGCCATGCCCT
Triticum aestivum genome assembly, chromosome: 7D.
OU015741.1:293998740-293998759
GAGGCTTGGCCCCTCGCGAGGGTCTTGAGT293998740GGTTGTTGATGAAGGTGGGTCGTACCAGGCCGTTGGCTGAGCCACGCCCT
Triticum aestivum genome assembly, chromosome: 6A.
OU343174.1:97148433-97148452
GAGGCTTGGCCCCTCGCGAGGGTCTTGAGT97148433GGTTGTTGATGAAGGTGGGTCGTACCAGGCCACTGGAGGTGCCATGCCCT
Triticum aestivum genome assembly, chromosome: 7D.
OU343189.1:299609590-299609609
GAGGCTTGGCCCCTCGCGAGGGTCTTGAGT299609590GGTTGTTGATGAAGGTGGGTCGTACCAGGCCGTTGGCTGAGCCACGCCCT
Triticum aestivum genome assembly, chromosome: 6A.
OU963887.1:95994489-95994508
GAGGCTTGGCCCCTCGCGAGGGTCTTGAGT95994489GGTTGTTGATGAAGGTGGGTCATACCAGGCCACTGGAGGTGCCATGCCCT
Triticum aestivum genome assembly, chromosome: 7D.
OU963892.1:290465904-290465923
GAGGCTTGGCCCCTCGCGAGGGTCTTGAGT290465904GGTTGTTGATGAAGGTGGGTCGTACCAGGCCGTTGGCTGAGCCACGCCCT
Triticum aestivum genome assembly, chromosome: 6A.
OV100752.1:98602450-98602469
GAGGCTTGGCCCCTCGCGAGGGTCTTGAGT98602450GGTTGTTGATGAAGGTGGGTCGTACCAGGCCACTGGAGGTGCCATGCCCT
Triticum aestivum genome assembly, chromosome: 7D.
OV100757.1:292408650-292408669
GAGGCTTGGCCCCTCGCGAGGGTCTTGAGT292408650GGTTGTTGATGAAGGTGGGTCGTACCAGGCCGTTGGCTGAGCCACGCCCT
Triticum aestivum genome assembly, chromosome: 6A.
OW530325.1:98602450-98602469
GAGGCTTGGCCCCTCGCGAGGGTCTTGAGT98602450GGTTGTTGATGAAGGTGGGTCGTACCAGGCCACTGGAGGTGCCATGCCCT
Triticum aestivum genome assembly, chromosome: 7D.
OW530330.1:292408650-292408669
GAGGCTTGGCCCCTCGCGAGGGTCTTGAGT292408650GGTTGTTGATGAAGGTGGGTCGTACCAGGCCGTTGGCTGAGCCACGCCCT
Triticum aestivum genome assembly, chromosome: 6A.
OX637240.1:66909311-66909330
GAGGCTTGGCCCCTCGCGAGGGTCTTGAGT66909311GGTTGTTGATGAAGGTGGGTCATACCAGGCCACTGGAGGTGCCATGCCCT
Triticum aestivum genome assembly, chromosome: 7D.
OX637245.1:215983730-215983749
GAGGCTTGGCCCCTCGCGAGGGTCTTGAGT215983730GGTTGTTGATGAAGGTGGGTCGTACCAGGCCGTTGGCTGAGCCACGCCCT
Streptomyces sp. NBC_01281 chromosome, complete genome.
CP108435.1:1339397-1339416
ACTCGATCGAACGGCCGGTCCCCCACAGGC1339397GGTTGTTGATGAAGGTGGGTGGGGAATCCTGGCTGCTGCCCTTGTCGCCC
Streptomyces sp. NBC_01428 chromosome, complete genome.
CP109499.1:1296976-1296995
ACTCGATCGAACGGCCGGTCCCCCACAGGC1296976GGTTGTTGATGAAGGTGGGTGGGGAGTCCTGGCTGCTGCCCTTGTCGCCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACCCACCTTCATCAACAACC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACCCACCTTCATCAACAACC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.751 | 0.743 | search_plus_done; http://172.18.8.135:50400/match?q=ACCCACCTTCATCAACAACC&k=0&no_gap=0&offset=0&limit=50
0.898 | 0.147 | search_minus_done; http://172.18.8.135:50400/match?q=GGTTGTTGATGAAGGTGGGT&k=0&no_gap=0&offset=0&limit=38
0.924 | 0.026 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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