GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 03:06:07, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Pipistrellus pipistrellus genome assembly, chromosome: 13.
LR862369.1:33363166-33363185
GCTGAGCTTCAGCTTCCCTCTTCCCCGGAA33363166ACCCCATCCTTTCAGACACAGCTCACACAGCCTCCAGGATGCAGCTCTGC
Eptesicus nilssonii genome assembly, chromosome: 16.
OX621295.1:39227404-39227423
GCTGAGCTCCAGCTTCTCTCTTCTCCGGAA39227404ACCCCATCCTTTCAGACACAGCCGACACACACCCTCCAGGACGCAGCTCT
Arachis hypogaea cultivar Shitouqi chromosome A04.
CP030986.1:120565083-120565102
CTGTCTTTTTCCAAGCAATTGAAAATTATC120565083ACCCCATCCTTTCAGACACAATAATTCTTAGTCCAGTGAATAGTTGACGT
Arachis hypogaea cultivar Shitouqi chromosome B04.
CP030996.1:122298849-122298868
ATGTCTTTTTCCAAGCAATTGAAAATTATC122298849ACCCCATCCTTTCAGACACAATAATTTTTAGTCCAGTGAATAGTTGACGT
Arachis ipaensis cultivar K30076 chromosome 04.
CP049895.1:134797691-134797710
ATGTCTTTTTCCAAGCAATTGAAAATTATC134797691ACCCCATCCTTTCAGACACAATAATTTTTAGTCCAGTGAATAGTTGACGT
Avena eriantha genome assembly, chromosome: 1C.
OU342740.1:28380510-28380529
AGGAGCATTGGAGGGCCATGAGATGGTGCA28380510ACCCCATCCTTTCAGACACATACATGGGCATCAGCAAGAACCAGAGGATG
Plecotus auritus genome assembly, chromosome: 9.
OY734030.1:24958815-24958834
AAAGCTGAATCCTGGAGGGTGTGTGTCAGC24958815TGTGTCTGAAAGGATGGGGTTTCCGGAGAATGGAGAAGCTGGAGCTCAGT
Arachis hypogaea DNA, clone: SATE0829.
DH968345.1:229-248
ATCTTCATTGGAGTAGCCACCAAAAATTAT229TGTGTCTGAAAGGATGGGGTGATAATTTTCAATTGCTTGGAAAAAGACAT
Avena eriantha genome assembly, chromosome: 6C.
OU342745.1:327419850-327419869
GGAGAAGCCTCACCTTGTTGATGCCATGTA327419850TGTGTCTGAAAGGATGGGGTTGCACCATCTCATGGCCCCCCAATGCTCCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ACCCCATCCTTTCAGACACA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ACCCCATCCTTTCAGACACA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.099 | 0.090 | search_plus_done; http://172.18.8.135:50400/match?q=ACCCCATCCTTTCAGACACA&k=0&no_gap=0&offset=0&limit=50
0.140 | 0.041 | search_minus_done; http://172.18.8.135:50400/match?q=TGTGTCTGAAAGGATGGGGT&k=0&no_gap=0&offset=0&limit=44
0.142 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).