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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 19:27:17, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Microcaecilia unicolor genome assembly, chromosome: 1.
LR594632.1:246016932-246016951
GATAACTCAAGCTAAGCTTTAGTAAAAGAC246016932ACCCTAAATTTGCTGACAACATAAAGTTGTTCAAAGTTGCTTGTAAAAAA
Mythimna impura genome assembly, chromosome: W.
LR990370.1:1791652-1791671
TTGGCCCCGGTAGGCTTCGACCCTGCTGGG1791652ACCCTAAATTTGCTGACAACTCCTTGAGGCGTGCGTGGGACAACACGCGC
Limnephilus lunatus genome assembly, chromosome: 9.
OU830600.1:67825282-67825301
AATAATAGGAAATGATCTGTTAGTTCAAGC67825282ACCCTAAATTTGCTGACAACAAGCATTAAAGCATTCTCAATTTGAGAGAC
Sarcophilus harrisii genome assembly, chromosome: 2.
LR735555.1:496835338-496835357
TCAGTAGGTAGGTGTCCTATCTCTTCCATG496835338GTTGTCAGCAAATTTAGGGTTTCTACTCATACTTTCTCCTCTTCCACCCC
Populus nigra genome assembly, chromosome: 10.
OX637681.1:9974164-9974183
ATATTAGCAAAGGCTATATAGAAAATATAT9974164GTTGTCAGCAAATTTAGGGTTAGGGTTTTTCACATTTAGCAAATCTATTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACCCTAAATTTGCTGACAAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACCCTAAATTTGCTGACAAC | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.135 | 0.127 | search_plus_done; http://172.18.8.135:50400/match?q=ACCCTAAATTTGCTGACAAC&k=0&no_gap=0&offset=0&limit=50
0.163 | 0.028 | search_minus_done; http://172.18.8.135:50400/match?q=GTTGTCAGCAAATTTAGGGT&k=0&no_gap=0&offset=0&limit=47
0.165 | 0.001 | cgi_end;

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