GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 09:13:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lactuca saligna genome assembly, chromosome: 1.
OX465077.1:4620532-4620551
CGACTCAGAGTGGGCCACTTTTTCTCAGCC4620532ACCGAACCACCACTCTTCACACTTTTAACCAGCCTCGAAAACTCAGTAAC
QGA9K10.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGA9K10, mRNA sequence.
BQ849345.1:218-237
GTTACTGAGTTTTCGAGGCTGGTTAAAAGT218GTGAAGAGTGGTGGTTCGGTGGCTGAGAAAAAGTGGCCCACTCTGAGTCG
QGC15P07.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGC15P07, mRNA sequence.
BQ860514.1:325-344
GTTACTGAGTTTTCGAGGCTGGTTAAAAGT325GTGAAGAGTGGTGGTTCGGTGGCTGAGAAAAAGTGGCCCACTCTGAGTCG
QGI10B11.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGI10B11, mRNA sequence.
BQ870803.1:267-286
GTTACTGAGTTTTCGAGGCTGGTTAAAAGT267GTGAAGAGTGGTGGTTCGGTGGCTGAGAAAAAGTGGCCCACTCTGAGTCG
QGI16F13.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGI16F13, mRNA sequence.
BQ872677.1:267-286
GTTACTGAGTTTTCGAGGCTGGTTAAAAGT267GTGAAGAGTGGTGGTTCGGTGGCTGAGAAAAAGTGGCCCACTCTGAGTCG
QGI4N01.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGI4N01, mRNA sequence.
BQ874250.1:267-286
GTTACTGAGTTTTCGAGGCTGGTTAAAAGT267GTGAAGAGTGGTGGTTCGGTGGCTGAGAAAAAGTGGCCCACTCTGAGTCG
QGE17A01.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGE17A01, mRNA sequence.
BQ982644.1:323-342
GTTACTGAGTTTTCGAGGCTGGTTAAAAGT323GTGAAGAGTGGTGGTTCGGTGGCTGAGAAAAAGTGGCCCACTCTGAGTCG
QGF12H11.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGF12H11, mRNA sequence.
BQ987524.1:616-635
GTTACTGAGTTTTCGAGGCTGGTTAAAAGT616GTGAAGAGTGGTGGTTCGGTGGCTGAGAAAAATGGCCCACTCTGAGTCGA
QGF23G14.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGF23G14, mRNA sequence.
BQ991637.1:301-320
GTTACTGAGTTTTCGAGGCTGGTTAAAAGT301GTGAAGAGTGGTGGTTCGGTGGCTGAGAAAAAGTGGCCCACTCTGAGTCG
QGF26M16.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGF26M16, mRNA sequence.
BQ992818.1:267-286
GTTACTGAGTTTTCGAGGCTGGTTAAAAGT267GTGAAGAGTGGTGGTTCGGTGGCTGAGAAAAAGTGGCCCACTCTGAGTCG
QGH10F10.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGH10F10, mRNA sequence.
BU006215.1:301-320
GTTACTGAGTTTTCGAGGCTGGTTAAAAGT301GTGAAGAGTGGTGGTTCGGTGGCTGAGAAAAAGTGGCCCACTCTGAGTCG
QGJ14J21.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGJ14J21, mRNA sequence.
BU010844.1:267-286
GTTACTGAGTTTTCGAGGCTGGTTAAAAGT267GTGAAGAGTGGTGGTTCGGTGGCTGAGAAAAAGTGGCCCACTCTGAGTCG
QGJ2E12.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGJ2E12, mRNA sequence.
BU012568.1:323-342
GTTACTGAGTTTTCGAGGCTGGTTAAAAGT323GTGAAGAGTGGTGGTTCGGTGGCTGAGAAAAAGTGGCCCACTCTGAGTCG
CLSY2172.b1_G16.ab1 CLS(XYZ) lettuce sativa Lactuca sativa cDNA clone CLSY2172, mRNA sequence.
DW134674.1:619-638
GTTACTGAGTTTTCGAGGCTGGTTAAAAGT619GTGAAGAGTGGTGGTTCGGTGGCTGAGAAAAAGTGGCCCACTCTGAGTCG
CLVX13942.b1_L05.ab1 CLV(XYZ) lettuce virosa Lactuca virosa cDNA clone CLVX13942, mRNA sequence.
DW148586.1:49-68
GTTACTGAGTTTTCTAGGCTGGTTAAAAGT49GTGAAGAGTGGTGGTTCGGTGGCTGAGAAAAAGTGGCCCACTCTGAGTCG
TSA: Lactuca sativa Letassy_X1_21860 mRNA sequence.
JI585177.1:1192-1211
GTTACTGAGTTTTCGAGGCTGGTTAAAAGT1192GTGAAGAGTGGTGGTTCGGTGGCTGAGAAAAAGTGGCCCACTCTGAGTCG
TSA: Lactuca serriola Serrassy_T_P2_14252 mRNA sequence.
JO031981.1:1198-1217
GTTACTGAGTTTTCGAGGCTGGTTAAAAGT1198GTGAAGAGTGGTGGTTCGGTGGCTGAGAAAAAGTGGCCCACTCTGAGTCG
Metellina segmentata genome assembly, chromosome: X1.
OX375872.1:17175375-17175394
TTTGAATTTGCTGTAGTTAAAATTGTTTGA17175375GTGAAGAGTGGTGGTTCGGTTTCTTTTTCGCGGCTGTACATTTTTTACAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/ACCGAACCACCACTCTTCAC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : ACCGAACCACCACTCTTCAC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.112 | 0.104 | search_plus_done; http://172.18.8.135:50400/match?q=ACCGAACCACCACTCTTCAC&k=0&no_gap=0&offset=0&limit=50
0.501 | 0.389 | search_minus_done; http://172.18.8.135:50400/match?q=GTGAAGAGTGGTGGTTCGGT&k=0&no_gap=0&offset=0&limit=49
0.512 | 0.011 | cgi_end;

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