GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:36:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

OPYF00430 Elaeis guineensis young flower 4-6 cm Elaeis guineensis cDNA clone 175-A1-T3.seq, mRNA sequence.
EL681364.1:186-209
GTTTTACCCTGAGAACACAATTACCTAATA186ACCGCTTCACCTGGATTAAATGGCTGAGACACATCTAGATTTTGTTGAAGGCCA
OPYF03017 Elaeis guineensis young flower 4-6 cm Elaeis guineensis cDNA clone MF49.seq, mRNA sequence.
EL683654.1:25-48
CCCTGAGAACACAATTACCTAATA25ACCGCTTCACCTGGATTAAATGGCTGAGACACATCTAGATTTNGTTGAAGGCCA
OPMF01031 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone 130-G11-T3.seq, mRNA sequence.
EL684792.1:192-215
GTTTTACCCTGAGAACACAATTACCTAATA192ACCGCTTCACCTGGATTAAATGGCTGAGACACATCTAGATTTTGTTGAAGGCCA
EG-M11_005_E06 InfSSHM1, normal male inflorescence Elaeis guineensis cDNA clone EG-M11_005_E06 non-orientated, mRNA sequence.
GT119440.1:38-61
GTTTTACCCTGAGAACACAATTACCTAATA38ACCGCTTCACCTGGATTAAATGGCTGAGACACATCTAGATTTTGTTGAAGGCCA
Contig124 DEGdwarf cDNA library from oil palm spear leaves Elaeis guineensis cDNA clone Contig124, mRNA sequence.
JZ905626.1:39-62
GTTTTACCCTGAGAACACAATTACCTAATA39ACCGCTTCACCTGGATTAAATGGCTGAGACACATCTAGATTTTGTTGAAGGCCA
OPYF00061 Elaeis guineensis young flower 4-6 cm Elaeis guineensis cDNA clone 128-F04-T3.seq, mRNA sequence.
EL681020.1:750-773
TGGCCTTCAACAAAATCTAGATGTGTCTCA750GCCATTTAATCCAGGTGAAGCGGTTATTAGGTAATTGTGTTCTCAGGGTAAAAC
OPYF02802 Elaeis guineensis young flower 4-6 cm Elaeis guineensis cDNA clone MF122.seq, mRNA sequence.
EL683484.1:373-396
TGGCCTTCAACAAAATCTAGATGTGTCTCA373GCCATTTAATCCAGGTGAAGCGGTTATTAGGTAATTGTGTTCTCAGGGTAAAAC
OPYF03012 Elaeis guineensis young flower 4-6 cm Elaeis guineensis cDNA clone MF45.seq, mRNA sequence.
EL683652.1:405-428
TGGCCTTCAACAAAATCTAGATGTGTCTCA405GCCATTTAATCCAGGTGAAGCGGTTATTAGGTAATTGTGTTCTCAGGGTAAAAC
OPYF03030 Elaeis guineensis young flower 4-6 cm Elaeis guineensis cDNA clone MF51.seq, mRNA sequence.
EL683659.1:393-416
TGGCCTTCAACAAAATCTAGATGTGTCTCA393GCCATTTAATCCAGGTGAAGCGGTTATTAGGTAATTGTGTTCTCAGGGTAAAAC
OPMF00092 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone 116-H10-T3.seq, mRNA sequence.
EL683863.1:750-773
TGGCCTTCAACAAAATCTAGATGTGTCTCA750GCCATTTAATCCAGGTGAAGCGGTTATTAGGTAATTGTGTTCTCAGGGTAAAAC
OPMF00248 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone 118-F01-T3.seq, mRNA sequence.
EL684014.1:381-404
TGGCCTTCAACAAAATCTAGATGTGTCTCA381GCCATTTAATCCAGGTGAAGCGGTTATTAGGTAATTGTGTTCTCAGGGTAAAAC
OPMF00612 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone 122-D10-T3.seq, mRNA sequence.
EL684374.1:135-158
TGGCCTTCAACAAAATCTAGATGTGTCTCA135GCCATTTAATCCAGGTGAAGCGGTTATTAGGTAATTGTGTTCTCAGGGTAAAAC
OPMF01275 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone 133-D02-T3.seq, mRNA sequence.
EL685035.1:557-580
TGGCCTTCAACAAAATCTAGATGTGTCTCA557GCCATTTAATCCAGGTGAAGCGGTTATTAGGTAATTGTGTTCTCAGGGTAAAAC
OPMF02127 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone OPN6WK_W1097.seq T3, mRNA sequence.
EL685885.1:403-426
TGGCCTTCAACAAAATCTAGATGTGTCTCA403GCCATTTAATCCAGGTGAAGCGGTTATTAGGTAATTGTGTTCTCAGGATAAAAC
OPR00569 Elaeis guineensis root Elaeis guineensis cDNA clone PLATE209-C3-T3.seq, mRNA sequence.
EL690538.1:753-776
TGGCCTTCAACAAAATCTAGATGTGTCTCA753GCCATTTAATCCAGGTGAAGCGGTTATTAGGTAATTGTGTTCTCAGGGTAAAAC
OPR00768 Elaeis guineensis root Elaeis guineensis cDNA clone PLATE211-D2-T3.seq, mRNA sequence.
EL690737.1:752-775
TGGCCTTCAACAAAATCTAGATGTGTCTCA752GCCATTTAATCCAGGTGAAGCGGTTATTAGGTAATTGTGTTCTCAGGGTAAAAC
OPR01354 Elaeis guineensis root Elaeis guineensis cDNA clone PLATE218-H9-T3.seq, mRNA sequence.
EL691319.1:578-601
TGGCCTTCAACAAAATCTAGATGTGTCTCA578GCCATTTAATCCAGGTGAAGCGGTTATTAGGTAATTGTGTTCTCAGGGTAAAAC
OPR01606 Elaeis guineensis root Elaeis guineensis cDNA clone PLATE221-F5-T3.seq, mRNA sequence.
EL691571.1:456-479
TGGCCTTCAACAAAATCTAGATGTGTCTCA456GCCATTTAATCCAGGTGAAGCGGTTATTAGGTAATTGTGTTCTCAGGGTAAAAC
OPR03548 Elaeis guineensis root Elaeis guineensis cDNA clone OPVRXX_A2871.seq, mRNA sequence.
EL693493.1:81-104
TGGCCTTCAACAAAATCTAGATGTGTCTCA81GCCATTTAATCCAGGTGAAGCGGTTATTAGGTAATTGTGTTCTCAGGGTAAAAC
pOP-CEO02126_EST_C_1_pSK_SK CEO (Oil Palm Embryogenic Callus) Elaeis guineensis cDNA clone pOP-CEO02126 5', mRNA sequence.
EY397082.1:167-190
TGGCCTTCAACAAAATCTAGATGTGTCTCA167GCCATTTAATCCAGGTGAAGCGGTTATTAGGTCTTGGTGAGCTGGTCCTGTAAA
pOP-CNI01334_EST_C_1_pSK_SK CNI (Oil Palm Non-Embryogenic Callus) Elaeis guineensis cDNA clone pOP-CNI01334 5', mRNA sequence.
EY404004.1:159-182
TGGCCTTCAACAAAATCTAGATGTGTCTCA159GCCATTTAATCCAGGTGAAGCGGTTATTAGGTAATTGTGTTCTCAGGGTAAAAC
pOP-EAP01409_EST_C_1_pBSK_SK EA (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EAP01409 5', mRNA sequence.
EY406319.1:116-139
TGGCCTTCAACAAAATCTAGATGTGTCTCA116GCCATTTAATCCAGGTGAAGCGGTTATTAGGTCTTGGTGAGCTGGTCCTGTAAA
pOP-EAP02788_EST_C_1_pBSK_SK EA (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EAP02788 5', mRNA sequence.
EY406648.1:159-182
TGGCCTTCAACAAAATCTAGATGTGTCTCA159GCCATTTAATCCAGGTGAAGCGGTTATTAAGTAATTGTGTTCTCAGGGTAAAAC
pOP-EAP02296_EST_C_1_pBSK_SK EA (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EAP02296 5', mRNA sequence.
EY407236.1:207-230
TGGCCTTCAACAAAATCTAGATGTGTCTCA207GCCATTTAATCCAGGTGAAGCGGTTATTAGGTAATTGTGTTCTCAGGGTAAAAC
EG-E11_005_B10 embsomSSHE1, Early somatic embryos (SSH) BAP/no BAP Elaeis guineensis cDNA clone EG-E11_005_B10, mRNA sequence.
JK668885.1:517-540
TGGCCTTCAACAAAATCTAGATGTGTCTCA517GCCATTTAATCCAGGTGAAGCGGTTATTAGGTAATTGTGTTCTCAGGGTAAAAC
Elaeis guineensis EST, clone (6lib)_isotig00466.
LM622420.1:755-778
TGGCCTTCAACAAAATCTAGATGTGTCTCA755GCCATTTAATCCAGGTGAAGCGGTTATTAGGTAATTGTGTTCTCAGGGTAAAAC
Elaeis guineensis clone estEgSNP15 translation elongation factor EF-1 betachain (EF1B) mRNA, complete cds.
JX438712.1:760-783
TGGCCTTCAACAAAATCTAGATGTGTCTCA760GCCATTTAATCCAGGTGAAGCGGTTATTAGGTAATTGTGTTCTCAGGGTAAAAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ACCGCTTCACCTGGATTAAATGGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ACCGCTTCACCTGGATTAAATGGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.478 | 0.469 | search_plus_done; http://172.18.8.135:50400/match?q=ACCGCTTCACCTGGATTAAATGGC&k=0&no_gap=0&offset=0&limit=50
1.703 | 1.225 | search_minus_done; http://172.18.8.135:50400/match?q=GCCATTTAATCCAGGTGAAGCGGT&k=0&no_gap=0&offset=0&limit=45
1.718 | 0.015 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).